Detailed information on CNT30575002


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONOSAT000108, E-value = 4e-107

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30678415Oryza barthiiSetaria viridis43.7310.7998.26115reverse complement
CNT30552078Oryza barthiiOryza glaberrima94.398.41100248forward

Expression of CNT30575002

Peptides detected in this lncRNA

>peptide 1 (42 aa)
LLKGSRKRGNFFWACILFLGSLGFLAVGAYSYLGKNIQNQKK*

Sequence

>CNT30575002
ACTTCTAAAAGGTTCTCGAAAAAGAGGTAATTTTTTCTGGGCCTGTATTCTTTTTCTAGGTTCACTAGGATTCTTAGCGGTTGGGGCTTACAGTTATCTT
GGTAAGAATATTCAGAATCAAAAAAAGTAAAGTCAAAATCATTTAGAACTTCTAAAAGGTTCTCGAAAAAGAGGTAATTTTTTCTGGGCCTGTATTCTTT
TTCTAGGTTCACTAGGATTCTTAGCGGTTGGGGCTTCCAGTTATCTTGATAAGAATATTAACT