Detailed information on CNT30552078


BLAST search results

BLAST vs Swiss-Prot:
sp|Q1KVR7|YCF4_TETOB, E-value = 3e-06

BLAST vs NONCODE:
NONOSAT000108, E-value = 6e-103

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30575002Oryza glaberrimaOryza barthii98.4194.3100248forward

Expression of CNT30552078

Peptides detected in this lncRNA

>peptide 1 (43 aa)
ELLKGSRKRGNFFWACILFLGSLGFLAVGAYSYLGKNIQNQKK*

Sequence

>CNT30552078
TAGAACTTCTAAAAGGTTCTCGAAAAAGAGGTAATTTTTTCTGGGCCTGTATTCTTTTTCTAGGTTCACTAGGATTCTTAGCGGTTGGGGCTTACAGTTA
TCTTGGTAAGAATATTCAGAATCAAAAAAAGTAAAGTCAAAATCATTTAGAACTTCTAAAAGGTTCTCGAAAAAGAGGTAATTTTTTCTGGGCCTGTATT
CTTTTTCTAGGTTCACTAGGATTCTTAGCGGTTGGGGCTTCCAGTTATCTTG