Detailed information on CNT30574595


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30554191Oryza barthiiOryza glaberrima72.229.9985.21169forward
CNT30102160Oryza barthiiOryza rufipogon72.228.6584.62169forward

Expression of CNT30574595

Peptides detected in this lncRNA

>peptide 1 (33 aa)
SSSLQEISGLYTADERWATDGDSLIRVFLHTGI*

Sequence

>CNT30574595
GTCCTCGAGCCTTCAGGAGATTTCTGGGTTATATACTGCGGATGAGAGGTGGGCCACTGATGGTGACAGCTTAATACGGGTATTCCTCCACACCGGTATA
TAATCTTAAGTTAACTTCCTGGGAAGGGTACTCCTCCGTATTTAGCCCCGGTTGTATGGTCATGACGGGATGTCGTAAGGAACTCGGCAGTCAGGGGTGG
CTTCTCGAAACACNANGANGACACTGGGTANGGG