Detailed information on CNT30573621


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30628398Vitis viniferaVigna unguiculata27.446.9783.33132forward
CNT3082373Vitis viniferaBrassica juncea21.837.1383.81105forward
CNT30725977Vitis viniferaLupinus angustifolius67.5757.9380.31325forward

Expression of CNT30573621

Peptides detected in this lncRNA

>peptide 1 (96 aa)
MLSITHSLLAFTPALAVSDNSTLTSPSRPAIAATCDMVSVSPPSRTTGFRYSATMRFTSSKWLPFNVSAAIPQFSGSLTQKLSTLLLPWQFVASIS*

>peptide 2 (57 aa)
MASLQRLRSHSPVQRITHAETLHLVASMAVRCIHILESPQRNNFKKLRERERERERN*

Sequence

>CNT30573621
TTTACCTGATGAGCTCCTTCTGAAGGGCACCACCTTGTTTGGTTCTCCTATGTGAAGTAGCACCAAACCCAGTGGTGACACCATAGCTGTCGGTGCCTTT
GCTCATGCTCTCCATCACCCACTCGCTGCTCGCGTTCACGCCCGCTCTCGCCGTCTCCGACAACTCCACACTCACATCCCCCTCCCGCCCGGCGATAGCC
GCCACCTGCGATATGGTAAGCGTCTCACCACCGAGCCGAACAACCGGCTTCCGGTACTCCGCCACCATGCGCTTCACTTCATCCAAATGGCTTCCCTTCA
ACGTCTCCGCAGCCATTCCCCAGTTCAGCGGATCACTCACGCAGAAACTCTCCACCTTGTTGCTTCCATGGCAGTTCGTTGCATCCATATCTTAGAATCC
CCACAAAGAAACAACTTCAAAAAGCTGAGAGAGAGAGAGAGAGAGAGAGAGAGGAACTAGAGAGTAGGGCTCTGAATTTAG