« Back to Vitis vinifera search


Detailed information on CNT30572452


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30515285Vitis viniferaJuglans regia23.9112.2989.2593reverse complement
CNT3069056Vitis viniferaQuercus suber23.658.786.9692reverse complement

Expression of CNT30572452

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MKKNKRGKKWLSGCERLRRRRWARGVPARYPSTEGSGR*

Sequence

>CNT30572452
ATTTTCAGAAACTAAACCCAGTCACTGATTTTGGCCCCCATTTACCCATGACCCACTGGCTGGAATGAAGAAAAACAAAAGAGGGAAAAAGTGGTTGTCG
GGTTGTGAGCGGCTGAGGAGGCGTCGTTGGGCCCGTGGAGTACCAGCACGTTATCCTTCCACCGAAGGGAGCGGGAGGTGAACGCTGCTCTGTGAATCCA
GCCTCACGCGGTGCCCTCCACTCTAGGAACCACGTCACCCAACCCTTCGGTCGGATCACAAGATTCAAACTCCCCACTTGGAACGGGCGAGCCAGTGTCT
CAACCCCAGCGCACCCTACCTCTCCAGCCAAACCAACCTTCAACCACCTTCATGCCCTCACTTGAGTCACAAGCCCACGTTACCAGGCC