Detailed information on CNT30568133


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673064Actinidia chinensisSetaria viridis6.1837.9790.18112forward
CNT30338755Actinidia chinensisEragrostis tef9.8232.0184.83178forward
CNT30368401Actinidia chinensisSorghum bicolor4.5222.7889.0282forward
CNT30646562Actinidia chinensisCannabis sativa16.9941.9678.57308forward

Expression of CNT30568133

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MKHSQNFYLFFFSRINYYNEQFSKKLFGQRFFSVSMGVF*

>peptide 2 (38 aa)
MNTLYVIIMCLQNHIYKIWSNCFNSLHCYIIYYERYMQ*

>peptide 3 (43 aa)
MLRVANSTPIVDLDSRLNSFLVNLESKFDFPTPESPISTTLNK*

>peptide 4 (42 aa)
MLRRHFLGNFFGPSLSQNDAISSHCRVAVSSSPQEPLIPKNC*

>peptide 5 (59 aa)
MRSYPPFQSSSSVSQNLDLDDLVIDVNAASGELDADCGLGLEAELVLGESGEQIRFSYA*

>peptide 6 (52 aa)
MDSRAEVSMKGALPFSKCLGIFSRHSPQVMQICLVSNEHDHNVQICVTPKLF*

>peptide 7 (32 aa)
RWVIPNVQSLPTHHMIYLSKNFGECIFHVHGL*

>peptide 8 (30 aa)
MNNFQKNCLVNGFLAFLWEFFEKKKYIFEK*

Sequence

>CNT30568133
CGCTGGGTCATCCCCAATGTCCAGAGCCTTCCTACTCACCACATGATATATTTGAGTAAGAACTTCGGTGAATGCATTTTCCACGTTCATGGACTCTAGA
GCGGAGGTCTCCATGAAAGGTGCTCTCCCTTTTAGCAAATGCCTTGGCATCTTCAGTAGACACAGCCCGCAAGTGATGCAAATCTGCCTTGTTTCCAACG
AGCATGATCACAATGTTCAAATCTGTGTGACCCCGAAGCTCTTTTAACCATCTCTCTACATTCTCAAATGTGACGTGTCGAGTGACATCGTAAACAAGCA
ATGCACCTACGGCACCTCGATAGTATGCACTTATGATTGCACGATATCTTCAACAAAAAAATGAAATGAGATGAGGATCCATTCCTAGGGAAACATAGTT
CAGTCAAAGTTCTTTGTAATCATAATCAAGTAAACACCACAATCTTTGTAATCGTAGTTTCTTCAAAGCAAGTAAAGTTTCGCGTGTAAGCATGGTTTAT
ATGTTGATTGAGGCCTGTTCATGGTTTCTCTGAAGGTTTGATTAACAAAGGGGAGAGTTCTGTTTCGTTGTTAAGCATAGTTCCCATGTTGACTGAGGCA
TGTTCAAAATGAAATACACTTTTCTCAGAAGTTTGAATATTTCTACTTTTGTATGTTTCTTTAGACTATTGAAAAACTGATAGATAGTCTAGTTAGTTCT
CTGTCTTTGTCAAAAGCCCTAGAAGCAGTATACAAATTGAGCGGTACTTTGGTATAGTTTTATTGCTTTTTCCAGAAAATTGAAACTCCAATGAATACTT
TATATGTTATAATCATGTGCCTTCAAAATCATATCTACAAAATATGGAGTAATTGTTTCAATAGCTTACATTGCTACATTATCTATTACGAGAGGTATAT
GCAATGAACGCAAAATGAAAAATACTTCAGGCCTTGCTCGGCCCGTTTTTGTACTTGCGTGAGATGAAACATTCACAAAACTTTTATCTGTTTTTTTTTT
CCAGAATCAATTACTATAATGAACAATTTTCAAAAAAATTGTTTGGTCAACGGTTTTTTAGCGTTTCTATGGGAGTTTTTTGAAAAGAAAAAATACATTT
TTGAGAAATAAAAAGATATCTTGCAATTCTGAAAAATCATTTCCAAAACATGGGTGTTCCTACCTATCAGACATTTCCTCAAATACCTTCCCTGCACCCC
TCAAATCCCCACAATTCTTCTTTGATCACGTAAGAAGAGAGAGAGAGAGCAGATTTCCAGAGAGAGGCTCAGATGAGGTCCTACCCACCGTTTCAATCGT
CTTCTTCAGTCAGCCAAAATCTGGACCTTGACGACCTTGTCATCGACGTGAATGCTGCGAGTGGCGAACTCGACGCCGATTGTGGACTTGGACTCGAGGC
TGAACTCGTTCTTGGTGAATCTGGAGAGCAAATTCGATTTTCCTACGCCTGAATCGCCAATCAGCACCACTTTGAACAAGTAATCGTAATCGTCATATGC
TACGGCGTCATTTTTTGGGTAATTTTTTTGGGCCTTCATTGAGTCAAAACGACGCCATTTCGTCTCACTGCAGGGTTGCAGTGAGCTCCTCCCCACAGGA
ACCCCTGATCCCTAAAAATTGTTGACAAGAAAATTTGAACATGTGACCTTGGGAATGGAAGTCTCGTAATCGTGGTCAGACTCTCACTCGAACAAGGAGC
CCATTTTGAAGTGGGTATAGGGGATAAGGGGAGACATAATCACATGGACCAAAAGAAATGTTAACCCACACCTCATCCCATGTCAAAAACATAGAAAGGA
TATACGGGGAGAC