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Detailed information on CNT30565205


BLAST search results

BLAST vs Swiss-Prot:
sp|P26573|RBS_NICPL, E-value = 3e-40

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30727206Actinidia chinensisCorchorus capsularis25.098.8181.77203forward
CNT30620550Actinidia chinensisCajanus cajan20.413.7780.61165forward

Expression of CNT30565205

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MMRSLLKMEKTRHKSIKVYEPDSFILNVAHITS*

>peptide 2 (82 aa)
MKARRRVDDETDALDLALVVESDDTDERVGVFLLVRLDLSSHLSRIGTPIHGKLPHGPVPPIVVPWGVVVLTVHKSFLKIKK*

>peptide 3 (40 aa)
MPPRGEEASMRASRTSSFQVEARVTEVTAEEEIVDAAMFG*

>peptide 4 (34 aa)
MKLTHWTWRLLSNPMIRMNESGYSFLFASTSART*

Sequence

>CNT30565205
AGACAATCGCGGAACATGAAATTTATCCATGAAAGCTCGGAGGCGTGTGGACGATGAAACTGACGCACTGGACTTGGCGCTTGTTGTCGAATCCGATGAT
ACGGATGAACGAGTCGGGGTATTCCTTCTTGTTCGCCTCGACCTCAGCTCGCACTTGAGTCGAATCGGTACACCCATACATGGGAAGCTTCCACATGGTC
CAGTACCGCCCATCGTAGTACCCTGGGGAGTGGTGGTGCTCACGGTACACAAATCCTTCCTGAAAATCAAGAAATAGTAGGTAGTTAGTTCGTAAGCAGA
TAAGCGAAAGAATGATGCGATCACTACTGAAAATGGAAAAAACCCGTCACAAATCCATAAAAGTTTATGAACCAGATTCATTCATTCTAAATGTAGCCCA
CATCACAAGTTGAATTCACACCACACTGAAATTGGTAATAGGAAGCAGCAGATAGAGCAAGAAGTTACCCCAACAGAGAACTCAATGCAAGGAATCCATC
CCATGCGAATGAGGTAATCAATTTGCTTAAGCAATGCCTCCTCGGGGAGAGGAGGCAAGTATGAGAGCGTCTCGAACTTCTTCTTTCCAAGTGGAGGCAC
GGGTCACGGAGGTAACCGCAGAGGAGGAGATTGTTGATGCAGCCATGTTTGGTTGAGACTTGAGAGGACTAATAAGCTCTCTAGCCTTGCTCAAGATTTA
TAGACGCAAAATTCACAACACCAATTTTACCCACTTTATCACAATCCCTCCAAATCAATGGTCTATATTCGCCTGGTGGTATTGGACATTTATGGGTCAT
AAGATTCCA