« Back to Actinidia chinensis search


Detailed information on CNT30562282


BLAST search results

BLAST vs Swiss-Prot:
sp|P06671|CB22_MAIZE, E-value = 1e-110

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30202642Actinidia chinensisHelianthus annuus50.5360.3284.23336forward
CNT30359114Actinidia chinensisLactuca sativa68.5780.4284.65456forward

Expression of CNT30562282

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MGRSFHRGKVDQQPHLAARQQYGSLQRLPSILLGKPKWQECFGRGSS*

>peptide 2 (29 aa)
MAHLQWITSSSRFLAKVSGSAESPAVSQP*

Sequence

>CNT30562282
GCTTTTCTTGATGAGATAAGTCTGAAATTAAAAAGTAAAAGATTAAGAGAAATAGAAACTAGATCAAAATGAATACTATTCAAGCAGTTAAAACGGAAAA
TTGACATTTTTTGCATTACTACAATCCAATTTACATCACACACTTTCCAAATTCAAAACCCTCCTTTTAATTTCCCCTCACTTTCCGGGGACAAAGTTGG
TGGCATAAGCCCAGGCATTGTTGTTAACTGGGTCAGCAAGGCCCAATGGGTCGAAGCTTCCACCGGGGTAAAGTGGATCAACAACCTCACCTAGCGGCCC
GCCAGCAATACGGTAGCCTTCAACGGCTCCCATCAATATTACTTGGCAAGCCCAAATGGCAAGAATGCTTTGGGCGTGGATCAAGCTAGGGTTGCCCAAG
TAGTCAAGCCCGCCCTCACTGAAGATCTGCGAACCGGCCTTGAACCATACAGCCTCACCGAACTTGACACCGTTGCGGGCCAAAAGCTCGGGAAAGACAC
AACCAAGAGCTCCAAGCATGGCCCATCTGCAGTGGATCACCTCCAGTTCACGGTTCTTGGCAAAGGTTTCAGGGTCAGCTGAAAGCCCAGCAGTATCCCA
ACCGTAGTCACCAGGGAATTCTCCGGTCAGGTAGGAGGGGGGATCACCAGATAGTGGGCCCAAGT