Detailed information on CNT30359114


BLAST search results

BLAST vs Swiss-Prot:
sp|P27492|CB21_TOBAC, E-value = 8e-113

BLAST vs NONCODE:
NONBNAT005173, E-value = 1e-65

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3092178Lactuca sativaSolanum tuberosum89.0755.885.35505forward
CNT30562282Lactuca sativaActinidia chinensis80.4268.5784.65456forward
CNT30173252Lactuca sativaTrifolium pratense67.0250.8783.68380forward
CNT30646148Lactuca sativaCannabis sativa44.0961.2786250forward

Expression of CNT30359114

Peptides detected in this lncRNA

>peptide 1 (86 aa)
MDQTRVSQVIKPTFTEDLGSSLEPYSLTELHTITGQELREDAAKSSKHCPSAVDDLKLTVLGKCLWISRKSGGVPAVVTWEFTGQV*

>peptide 2 (31 aa)
MGRSYHQGKVGQQPHPMVHRQFCSPQQHPSR*

>peptide 3 (35 aa)
MSLDQQKVRRCPSRSHLGIHRSGMMEPRRRMGLGT*

Sequence

>CNT30359114
CCCAAAAATAGCTATATATTAATTCACAAATCATTTTACATCAAAACCCTTATTTAGTACATTCACTTTCCGGGGACAAAGTTTGTAGCATAAGACCAGG
CGTTATTTGCAACAGGGTCAGCAAGGCCCAATGGGTCGAAGCTACCACCAGGGTAAAGTGGGTCAACAACCTCACCCAATGGTCCACCGGCAATTCTGTA
GCCCTCAACAGCACCCATCAAGATGACTTGGGTGGCCCAGATAGCCAAGATGCTCTGAGCATGGACCAAACTAGGGTTTCCCAAGTAATCAAGCCCACCT
TCACTGAAGATCTGGGATCCAGCCTTGAACCATACAGCCTCACCGAACTTCACACCATTACGGGCCAAGAGCTCAGGGAAGACGCAGCCAAGAGCTCCAA
GCATTGCCCATCTGCAGTGGATGACCTCAAGCTCACGGTTCTTGGAAAATGTCTCTGGATCAGCAGAAAGTCCGGCGGTGTCCCAGCCGTAGTCACCTGG
GAATTCACCGGTCAGGTATGATGGAGCCTCGCCGGAGAATGGGCCTAGGTACTTGACACGGTCAGGG