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Detailed information on CNT30562261


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9LT78|RD21C_ARATH, E-value = 2e-22

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3046702Actinidia chinensisPrunus dulcis4035.6782.79122forward
CNT30705576Actinidia chinensisPrunus avium20.3313.390.3262forward

Expression of CNT30562261

Peptides detected in this lncRNA

>peptide 1 (57 aa)
AGTAYSVRIVAAAIDEAVVKKLENAAARLSGSAVGEVPALSRRRRGRRRRWWWRWSR*

Sequence

>CNT30562261
GTGCCGGTACAGCATACAGCGTCCGTATAGTCGCAGCAGCCATAGATGAGGCAGTAGTCAAAAAACTTGAAAATGCAGCAGCACGTCTCAGTGGCAGCGC
AGTAGGAGAAGTCCCCGCACTGAGTAGGCGACGGAGAGGGAGGCGGAGGAGGTGGTGGTGGAGATGGAGCAGATGATTCTTTAGTTGGATAAGAGGCCAT
GGCATTGATTGCACAAACCCCATAGTCTTTGCTAGTGTTCCTTTTTATATAGGCATACCCCTCCATTCCCCAATCTGTTCCCCACGAGTTCTTTATTATC
CAGTA