Detailed information on CNT30553261


BLAST search results

BLAST vs Swiss-Prot:
sp|Q39176|ERLI1_ARATH, E-value = 3e-20

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30596824Oryza glaberrimaOryza meridionalis99.2686.4786.03537forward
CNT30105287Oryza glaberrimaOryza longistaminata104.9990.8889.96568forward
CNT30101048Oryza glaberrimaOryza rufipogon10082.0997.6541forward
CNT30575559Oryza glaberrimaOryza barthii90.7685.9997.76491forward
CNT30116313Oryza glaberrimaOryza nivara91.1387.88100493forward

Expression of CNT30553261

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MGRLRLQHGCRGGVPSCTFISPFSTFAHTPSFSVSIGH

>peptide 2 (54 aa)
STVRVELTGMQKRRDAVRTDAYTMRSIEYKLINQLCRYTYTSRRMKHALITSWN*

Sequence

>CNT30553261
TAGTACAGTACGTGTAGAATTAACAGGCATGCAGAAAAGACGAGATGCAGTACGTACTGATGCATATACGATGAGATCCATCGAGTACAAATTAATTAAT
CAATTATGCAGATACACATATACAAGTAGACGAATGAAGCATGCTTTAATTACGTCGTGGAACTGAATCATATGCATGCATATATATCTCATTAATTTAC
GGGATGAAGGAGGAAATTAAGGCACGCAGATACATATGATGATTTGAACAAGGAACAAATTAGACATAGATAGATATATAGTTGTACGTGGCCTGGTGGT
CGTTCTTCGTACGTTCTTGTGTGTAGCAAGCAGTGAAGTAGAATGGAGCAGCAGCTATATTAGTTGCTGCACTGGAAGCCGGAGGGGACGGAGCGGCCGC
AGTAGTTGACGAGGAGGCTGAGGTTGATGGGGAGGTTGAGGCTGCAACACGGCTGCCGCGGCGGCGTCCCCAGCTGCACGTTTATCAGCCCATTCAGCAC
GTTCGCGCACACCCCCAGCTTCAGCGTGTCGATCGGGCATC