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Detailed information on CNT30553210

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30105288	Oryza glaberrima	Oryza longistaminata	88.81	64.77	89	500	forward
CNT30100591	Oryza glaberrima	Oryza rufipogon	101.42	65.41	95.97	571	forward

Expression of CNT30553210

Peptides detected in this lncRNA

>peptide 1 (46 aa)
GMQKRRDAVRTDAYTMRSIEYKLINQLCRYTYTSRRMKHALITSWN*

Sequence

>CNT30553210
GGCATGCAGAAAAGACGAGATGCAGTACGTACTGATGCATATACGATGAGATCCATCGAGTACAAATTAATTAATCAATTATGCAGATACACATATACAA
GTAGACGAATGAAGCATGCTTTAATTACGTCGTGGAACTGAATCATATGCATGCATATATATCTCATTAATTTACGGGATGAAGGAGGAAATTAAGGCAC
GCAGATACATATGATGATTTGAACAAGGAACAAATTAGACATAGATAGATATATAGTTGTACGTGGCCTGGTGGTCGTTCTTCGTACGTTCTTGTGTGTA
GCAAGCAGTGAAGTAGAATGGAGCAGCAGCTATATTAGTTGCTGCACTGGAAGCCGGAGGGGACGGAGCGGCCGCAGTAGTTGACGAGGAGGCTGAGGGC
GGTGAAGAAGAGGAGGTTCAGGGCCAGGAGCGTGGCGATCACCCCAGCTTTCGTCGCCATGCCCACCCACCGCACTGCACCTGCAGATCGATCTCGATCT
ATGGCCTGCCCTCTACCTAGCTTTGCTTGCTAGCCAGTGTATTCAGATACATCTATCGACCAA