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Detailed information on CNT30100591


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30553210Oryza rufipogonOryza glaberrima65.41101.4295.97571forward
CNT30105279Oryza rufipogonOryza longistaminata96.11104.2287.37839forward

Expression of CNT30100591

Peptides detected in this lncRNA

>peptide 1 (70 aa)
VASTNDWDRWIEQELASTVCVELTGMQKRRDAVRTDAYTMRSIEYKLINQLCRYTYTSRRMKHALITSWN*

Sequence

>CNT30100591
ACGTAGCTAGTACAAACGATTGGGACCGATGGATCGAACAAGAGCTAGCTAGTACAGTATGTGTAGAATTAACAGGCATGCAGAAAAGACGAGATGCAGT
ACGTACTGATGCATATACGATGAGATCCATCGAGTACAAATTAATTAATCAATTATGCAGATACACATATACAAGTAGACGAATGAAGCATGCTTTAATT
ACGTCGTGGAACTGAATCATATGCATGCATATATATCTCATTAATTTACGGGATGAAGGAGGAAATTAAGGCACGCAGATACATATGATGATTTGAACAA
GGAACAAACTAGACATAGATAGATATATAGTTGTACGTGGCCTGGTGGTCGTTCTTGTGTGTAGCAAGCAGTGAAGTAGAATGGAGCAGCAGCTATATTA
GTTGCTGCACTGGAAGCCGGAGGGGACGGAGCGGCCGCAGTAGTTGACGAGGAGGCTGAGGTTGATGGGGAGGTGAAGAAGAGGAGGTTCAGGGCCAGGA
GCGTGGCGATCACCCCAGCTTTCGTCGCCATGCCCACCCACCGCACTGCACCTGCAGATCGATCTCGATCTATGGCCTGGCCTCTACCTAGCTTTGCTTG
CTAGCCAGTGTATTCAGATACATCTATGGACCAAGGGGTGCACTCATATTTATAATAGGATCGGAGTACCTTCAATTACTTAACCAGCTACCACATCACT
TAACTAACTAATTAACTAATCGGATTTTAACTAGGATTTCATCTTAGGTGCAGCTCACATCACTACAGCGTAACTACTACTAGTGACCTAGCTAGCTAGC
TGGCCTGGAGTACATTAATTCATTGGAGTATAGTGCTACTAGCTAGTGGGCTTTTGGTAGCTTAGCTGGCCGC