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Detailed information on CNT30551599


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30370153Oryza brachyanthaOryza glumipatula39.2515.5293.04115reverse complement
CNT30107866Oryza brachyanthaOryza longistaminata39.258.5894.78115reverse complement

Expression of CNT30551599

Peptides detected in this lncRNA

>peptide 1 (40 aa)
EVKDRCFGTFWSKVWLNDHEQMKLAHQVFKTVENEMRHGR*

Sequence

>CNT30551599
CGAGGTGAAGGACAGGTGCTTTGGCACCTTTTGGAGTAAGGTTTGGTTAAATGATCATGAGCAGATGAAGCTTGCACATCAAGTGTTCAAAACAGTTGAA
AATGAGATGAGGCATGGGAGGTGAGGGTGCTGCAGAACTGATAAATACAAAACAACGGCTCTTTCAGTCTGGTCACAAATCATCTCTTCTTAAGTAGCCG
TGAGCCTTTCAGAAGCTTTCATTGTCTGTGTTCTCGGAGTTATCATTCACAATTTAAGTCGGGCGTATTTTGACATTCTCAAGAAGCTTCCAC