Detailed information on CNT30370153


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30107866Oryza glumipatulaOryza longistaminata83.8146.3497.58621forward
CNT30551599Oryza glumipatulaOryza brachyantha15.5239.2593.04115reverse complement

Expression of CNT30370153

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MLRRKKIKAADGLQLLQKDVCMYQFYKCQLKPP*

>peptide 2 (41 aa)
FENYLQVLVALQGALTVIGNITMCIAAFRIFKASQESSKSS*

>peptide 3 (42 aa)
MVHCQCCTACKERQRRAGGGRTTSAAAGGGRTTTEAVGVPRRR

>peptide 4 (59 aa)
MDWPAGVNDQICSSNDQWCIANVARPARRGNGERGEDGRRRRRRVEGGRRRRRWESRAGA

>peptide 5 (70 aa)
MPHLIFNCFEQLLCKLLLLMIIYQTCSKRCQSTCPSPRDALGMWLHNTNPEPISHTPCYCWMSGDGEPSS*

>peptide 6 (66 aa)
MVNQVHESWTGQPVSMTKFAAAMTNGALPMLHGLQGEATESGGRTDDVGGGGWRADDDGGGGSPAPA

Sequence

>CNT30370153
TTTGAAAACTATCTGCAGGTGCTTGTAGCGCTCCAAGGTGCTCTAACAGTGATTGGTAACATTACAATGTGCATAGCTGCATTTCGCATCTTCAAAGCAT
CCCAGGAAAGCTCAAAAAGTTCATAGAGTTACACCTGACATGAAATGGCAAACGGCAGATGCTGCGAAGGAAGAAGATAAAAGCTGCTGATGGCTTGCAG
CTACTTCAGAAAGATGTTTGTATGTATCAATTCTACAAATGCCAGCTAAAGCCACCCTGAAATTTGTGTATTGACTTGGTTTTTTTCTAGACAATGAGTG
TATTTACTCAGATAAGAAGAAAAATTACCTCACCTGCTATAGCCTATGCCTCATCTCATCTTCAACTGTTTTGAACAACTGTTGTGCAAGCTTCTTCTGC
TCATGATCATTTACCAAACCTGCTCCAAAAGGTGCCAAAGCACCTGTCCTTCACCTCGAGATGCTCTTGGCATGTGGCTTCATAATACTAACCCTGAACC
AATATCACACACTCCCTGCTATTGCTGGATGAGTGGTGATGGTGAACCAAGTTCATGAATCATGGACTGGCCAGCCGGTGTCAATGACCAAATTTGCAGC
AGCAATGACCAATGGTGCATTGCCAATGTTGCACGGCCTGCAAGGAGAGGCAACGGAGAGCGGGGGGAGGACGGACGACGTCGGCGGCGGCGGGTGGAGG
GCGGACGACGACGGAGGCGGTGGGAGTCCCGCGCCGGCGCC