Detailed information on CNT3055148


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FUZ1|METK2_BRAJU, E-value = 1e-61

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673491Amborella trichopodaSetaria viridis4.6223.8684.88172forward
CNT30194995Amborella trichopodaPisum sativum5.5321.6483.98206forward
CNT3086108Amborella trichopodaVigna radiata5.4220.0885.15202forward
CNT30471855Amborella trichopodaSaccharum spontaneum5.1320.7685.34191forward

Expression of CNT3055148

Peptides detected in this lncRNA

>peptide 1 (94 aa)
MDEDLMFQLCGGCSGWLLPLEWLYNLPSEVSCNLIIGHSLIVLGRDQHSVNTNRYHGSAIIEVFNSHLGLAIRAQPWAGPVLSYLGEPSAQLGG*

>peptide 2 (88 aa)
MAQWHELRGVADDFLIVNIALCGDFTKDHDHVGLGAGLAGDLGIRVLLKAGIEDSIRDLVAEFVRVPLVHRFGCKEESLHFLSPLTLQ*

>peptide 3 (40 aa)
MNHATKDFNISLKELVKSQTRKKRGMLFALNRKKLTQILV*

>peptide 4 (38 aa)
MLLRHRILQLSLDTLCEFMGPQISSGVKKTILISNSRP*

>peptide 5 (41 aa)
MLNITESFINELSHKKHAFIFKGSNQNGGGAFGIYQLRLSF*

>peptide 6 (42 aa)
MLSNLISEQSYHSSDPNIPKYTKVGWIAMRKFDGRCPISIKK*

>peptide 7 (56 aa)
MTMLVLVQVSQATLESGSCSRQASRTASEIWSQSLSGCPSFTDSDVKRKVSIFSLL*

>peptide 8 (56 aa)
MAPPSLKYSTVTWVLPSGRSHGQVPFFRTSVSRAPSLVASTWLSGMSSGVSRTIFS*

>peptide 9 (58 aa)
NKLLAYELPSDAAALKSHQGFIDGVDHREIPSQRITVFRFQIPVHKYFMLPTLKNKNS*

>peptide 10 (62 aa)
MGLIIEKFRVKELQSFASKYQSTNTLCSQPLKTKTANKPPKEGNQKKKKRTTIIHTNTYNNQ*

>peptide 11 (44 aa)
MDMISEPPHATSTSDSATFLGHSVRIYGTPNIFWSKKNYLDLEF*

>peptide 12 (47 aa)
MNTRLHKLRCRSSSTSHNKQIFNEWSCSHLINPKSESKNKSQRKPFY*

>peptide 13 (48 aa)
MKISCFNYAVVVAAGFSHLSGFTTSQVKSAAISSLVTVSSCWVEISTV*

>peptide 14 (49 aa)
MTEAINYLYTYRKSMYDNFFSYKKQLSYQEASRNINIVGHRTRQKQLEL*

Sequence

>CNT3055148
CAATAAATTGCTTGCGTACGAGTTACCAAGTGACGCTGCTGCCTTGAAAAGTCACCAAGGTTTTATAGATGGGGTTGATCATAGAGAAATTCCGAGTCAA
AGAATTACAGTCTTTCGCTTCCAAATACCAGTCCACAAATACTTTATGCTCCCAACCCTTAAAAACAAAAACAGCTAATAAACCACCAAAGGAAGGCAAC
CAAAAAAAAAAAAAAAGAACCACCATAATTCATACAAACACTTATAACAACCAGTAGAAATAATAGTAGAATTCGGCATCTTATTGGCCGTCAGCTCGGA
ACATAAAGGGTCGAATCGATGGATGAAGATCTCATGTTTCAATTATGCGGTGGTTGTAGCGGCTGGCTTCTCCCACTTGAGTGGCTTTACAACCTCCCAA
GTGAAGTCAGCTGCAATCTCATCATTGGTCACAGTCTCATCGTGTTGGGTCGAGATCAGCACAGTGTGAACACGAACAGGTACCATGGCTCCGCCATCAT
TGAAGTATTCAACAGTCACTTGGGTCTTGCCATCAGGGCGCAGCCATGGGCAGGTCCCGTTCTTTCGTACCTCGGTGAGCCGAGCGCCCAGCTTGGTGGC
TAGCACATGGCTCAGTGGCATGAGCTCCGGGGTGTCGCGGACGATTTTCTCATAGTCAATATTGCCCTTTGTGGTGATTTCACCAAAGACCATGACCATG
TTGGTCTTGGTGCAGGTCTCGCAGGCGACCTTGGAATCAGGGTCCTGCTCAAGGCAGGCATCGAGGACAGCATCAGAGATTTGGTCGCAGAGTTTGTCAG
GGTGCCCCTCGTTCACAGATTCGGATGTAAAGAGGAAAGTCTCCATTTTCTCTCTCCTTTAACTCTGCAATAATAGCAATGGACACGTAAATCAAATGGT
CTCAAGAAACATCAAGGTGCCAGTTCAAGAATAACTTTGAGAGCAATGACAGTGAGCACATAAATCAGATAGCACCGATAATATCAGTTCAGGATTAATC
TTTTAGAGAGAGAGAGACAGAGAGAAAGAGAGAGAGCGAAGAAGCAACCACTCGACTTAAAATGTTGAACATAACAGAGAGCTTTATAAATGAATTGTCG
CACAAAAAGCACGCCTTCATTTTTAAAGGGTCGAATCAAAATGGTGGTGGTGCCTTTGGTATATATCAGTTGAGACTCAGCTTCTGATACTGGAATAAAG
GGGCTGTAAAGCAAACTAAATATGACCTATTAACTCATCCAAGGGGCAGAGTGGGCCTTAGAGGAACATCTGGTTCCTTAGAACACTAGCTCTCATTTAA
GGGAATATTATTCCCAGAAGAATAATCCCCAAGAACCTTGAATAAAAAGAAAAACTATAAAGAATTATCCCAAAGGAAATCAACATTTAGGTAGAAGGTG
GTATGGAATCATAGGTAGATGCGAGCGATCATGTGAACTATCAATCAGTGTACAATATATGCAATCTTTGATACACATGCAAAAGATATGACTGAAGCTA
TCAATTATCTATATACCTACAGAAAAAGTATGTATGATAATTTCTTTTCTTATAAAAAGCAACTATCATATCAAGAAGCTAGTCGGAATATCAATATAGT
AGGACATAGAACGAGACAGAAACAGCTTGAACTTTAGTTGGTTCAATGGATATGATTTCTGAGCCCCCTCATGCTACTTCGACATCGGATTCTGCAACTT
TCCTTGGACACTCTGTGCGAATTTATGGGACCCCAAATATCTTCTGGAGTAAAAAAAACTATCTTGATCTCGAATTCTAGACCATAAATTCTAACTAAAA
ACCTTGTGGTGGTCCCAAGTTTCTGAGGGCCGTTGCCCTTCAAAAAAAAAAACCCAATGGGCACAAAAACAAAGGGCATCTAAACTATTGCTGCTGTAAA
AACCAGTCCCTCTACTATAGCATCCCCACATGTTATCCAACCTTATTTCTGAACAGAGTTATCATTCATCTGACCCAAATATACCCAAATATACAAAAGT
TGGATGGATTGCTATGAGGAAATTTGATGGACGATGTCCTATTTCAATCAAGAAGTAATTGAAGCCCTAGTTCACTGAAAGTTGTTTTTGGGTTAATATA
CCATGATAAACAAAATCAAGATGCATCTCCTGCATCAGAAGCTCCATATTTGAAACTCGGAAAAAAAGCTGGAGAAGCTCCATATCAGGGTACTGGGAGG
AACAAGACCACTGGCTCTCTGTTTCTAAAAGAAAAGACCAGCACTACCTCTCCATAACTTACAATCACATCCTAATCCTCCGAAACCATTGTTTGGGAAA
CCTCAATATTAAGTAGTCATCAATTCATCGTTTTCCTTTAGGATCTCCATTGTTTTGTGTTCTCTGATTTTTTCACGCTAATTTCTTCCTTTTTTATATT
GTTATTTAAGTTCAAAGGAGCTCTCAAATATTTATTCACCGCAATAAATTTTATTATTACAATTTCGTCCAGTACTCCATTACTTGCAGAGTGGTAAAGG
CAAAATGTTGACTCAGTAAACATGAATCATGCAACCAAAGACTTCAACATCAGTTTGAAGGAATTGGTCAAAAGTCAAACGAGGAAAAAAAGAGGCATGC
TTTTCGCTCTCAATCGAAAGAAATTAACACAAATCTTAGTCTAAAAGTGTATGTACAACAAAAAAAATCATTTTAATAGTTTCATTAAATCTCAGTCTAA
AAACTGTAACTAGATCAGAAACCATTCCATTTTTCATCTCACTGGAACCATGCAAATATTAAGGCAAAACAAAAATCTGGTGTACCATTTGTATCTGAAA
AGTTCAAGCTAATCTTATGAGACAACCTAGATATAAAGACCAGTAATTTTAAAAGAAAGGAATAAAAATGAAAGGTAATTTCAAAAGAAATAAGAGAAAT
GGTTATCTTAGTTTTTCACCACACAATTAGAGGCCAGATCTCAAGTTCATAAATAAAATGTAATAATGGCCTAGATTAGATGAATACGAGGCTCCATAAG
CTAAGGTGTAGGTCTTCCAGCACTAGCCATAACAAGCAAATATTTAACGAGTGGAGTTGCAGTCACTTGATAAACCCAAAGAGTGAAAGCAAAAACAAAT
CCCAGAGAAAACCCTTCTATTAAACAACCCACGAGCTCTCTATTGAGCTCAAGGAGTTGAATCAAAACACTTCCAGATCAACTAGTGAACAAAACATAGA
AAACATGGGATCTTCCACATATTTAAATCCAGCTCTAAAATCTCCTAGGTGACACTCCAGAATAAAAAATCAACACAAAGAAAGCATTTAAATCCCTAAA
AAACCACAGATCGAGCAGGACTATCAGAAGAGAGACTGCAATTAAGCAATAAAAAAAGTAAACACGTGATCTAGCAGTCTGCAGAACACTAAATTGGCAC
AAAGAAATAAAAACCAAAATACCATTTCAAAAATGAAAAGTACGGTAAAACAAACAGTAGCCAAGCTAACTCCTACAAAAATTGAACCAGATCCAAGCAA
AAACCCAGTATAAATGCAGAAACCGAGCAAAAAATAAACCCTCGTCCACAAAAAATGCAGATCTAAACACTTGCAAATAACTTCACAACAATGGCGAAAT
GAAAGAGGTAGAGAAAGACTAGCAAACCTGAAACCTACGGCACAAGCCTTGTAAATGAAGACGAAGAGAGAGTGAGAGAGGCCCTTAAAGACTTTGTATA
GTGAGAAACCCACCGGTTCGACACC