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Detailed information on CNT30546743


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30538793Ipomoea trilobaBrassica napus16.9421.7691.6784forward
CNT30609975Ipomoea trilobaGossypium raimondii15.3220.0594.7476forward

Expression of CNT30546743

Peptides detected in this lncRNA

>peptide 1 (58 aa)
PKWAELNKPIVNKFATRVSLINPHPLAFHPRILDTYIAASSSSTEAESSIFTSITPSG*

Sequence

>CNT30546743
CCAAAATGGGCCGAGTTAAACAAACCCATCGTGAACAAATTCGCAACTAGGGTTTCCCTTATAAATCCCCATCCCCTCGCTTTCCACCCTAGAATCCTAG
ATACGTATATTGCCGCATCATCTTCGTCGACTGAAGCAGAGAGTTCAATTTTCACGAGCATAACACCTTCAGGATGAGAGCTAAGTGGAAGAAGAAGCGT
ATGAGAAGGTTGAAGAGGAAGCGCAGAAAGATGAGGCAGAGATCGAAGTAGAGTGGAAGATTTGTTTTGCTTCAACTTTAGGCTTCCGATTAATGGCTTT
TCCTTTTTTTAGTTTTGTTTTTGAAATTTGTCAGTGACGTTTTCGAGATGTAATCCCGACGCCGTTGTGCATCGGTTTATCTGAGATTTTGGTACCAGTT
TTCTAATTAAATACTATTCCCGCCATATGTGCCTCTTGATTCTTTTTAAGTATTGTTTGTGGCTTAAATGTGCTTTTATACTATCCTGTGTGTTGC