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Detailed information on CNT30526724


BLAST search results

BLAST vs Swiss-Prot:
sp|Q8VZ80|PLT5_ARATH, E-value = 1e-130

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30517802Phaseolus vulgarisJuglans regia14.7135.9584.87119forward
CNT30632133Phaseolus vulgarisVigna unguiculata21.5125.2286.78174forward
CNT30120990Phaseolus vulgarisCitrus clementina18.1721.7580.95147forward

Expression of CNT30526724

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MIPLRISIWTSDTLRSRCMYKAAPLMTPISGVIK

>peptide 2 (33 aa)
GAVQNDGVDARSLGEEVNPERRDEDVANGATGV*

>peptide 3 (69 aa)
MSASLSRASSSESEILCRILFASPNRPCATSHLGDSGMANTATARKMAGTAPTPSMSRHPSRSGSFENP*

Sequence

>CNT30526724
GGGGCTGTACAAAACGACGGCGTCGATGCCCGTAGCTTGGGCGAAGAAGTGAATCCCGAGCGACGCGATGAAGATGTGGCAAACGGCGCGACTGGGGTGT
AGGAAAAGCTCTTTCCATACGCCTTGCCCGTGACTCCGCTTGGTCACTAATACGACGTCGTCGTCGCAGTCCTGAGGAATCCCAGCCGTGTCTTTTATGT
CGGCTAGCCTTAGCCGAGCCTCTTCCTCCGAGTCCGAGATTTTGTGCAGAATTCTCTTTGCTTCGCCTAATCGACCTTGCGCCACGAGCCACCTCGGTGA
CTCCGGCATGGCCAACACTGCCACCGCTAGAAAAATGGCCGGAACGGCTCCCACTCCAAGCATGAGCCGCCATCCCAGCCGAAGCGGCAGCTTCGAAAAT
CCGTAGTTTGAAATGTATCCTATTAGAATCCCTCCGTTCAGGAATATCTGAAAAACCGAAATGGCGAAGCCGCGAGCGGAGGTAGGGGAGATTTCGGAGT
TGTAGACGGGGGCGATGAGGAAGGCGAAGCCGATGCCGACGCCGGCGAAGAAGCGGCCAAACATGAGAAAGGCGTAGTTAGGGGAGAATCCCATGAGGAT
TGCTCCGACGAAGAAGATGACGCCGGCGAGCGCAATGGTGTAACGGCGACCTATCCAGTCGGAGGTTCTGCCGGCGATAAAAGAGCCTACCGGCGAGTAG
AGGTTAATGATTCCACTCAGGATTTCGATTTGGACGTCCGATACTTTGAGATCTCGTTGTATGTACAAAGCTGCTCCACTCATGACTCCAATATCTGGAG
TGATTAAAA