Detailed information on CNT30526543


BLAST search results

BLAST vs Swiss-Prot:
sp|P27480|LOXA_PHAVU, E-value = 2e-72

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30631678Phaseolus vulgarisVigna unguiculata96.437894.87351forward
CNT30709440Phaseolus vulgarisGlycine max96.9845.0392.07353forward
CNT3087387Phaseolus vulgarisVigna radiata68.1315.0983.87248forward
CNT30620387Phaseolus vulgarisCajanus cajan22.811.7491.5783forward
CNT30704118Phaseolus vulgarisPrunus avium22.251087.6581forward
CNT30176589Phaseolus vulgarisVigna angularis25.5533.9495.793forward

Expression of CNT30526543

Peptides detected in this lncRNA

>peptide 1 (38 aa)
FHHQSNLDCPSVQDRPHQKHVLTISLSLKGPQWPHIFL*

Sequence

>CNT30526543
CTTTTCATCATCAGTCCAATTTGGATTGTCCCTCTGTCCAAGATAGACCTCATCAGAAGCATGTCTTGACAATATCGCTATCACTGAAAGGTCCACAATG
GCCTCATATTTTCCTGTAATTGTTCTCAGATAAGCCTTTTGATGATTGCTGCTCAGCTCATCATATTCTTTGGTTCCTGGCTCTGGGATCAATCTTCTGG
TTAGAGTTGGACGGTTTAGGATGTAACCTCCATAAGGGTATTGTCCAAAATTAACAGCTGCATGGAGAGCTGAAGCAGTCCATATTATAATGCTGCAAAT
GTGAATCAGATTTTGAGGAGTGTTCAACTTTGGCCACCATGGTTTGTCTTTCAAGTCACCATGA