Detailed information on CNT30176589


BLAST search results

BLAST vs Swiss-Prot:
sp|P09186|LOX3_SOYBN, E-value = 6e-43

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30526543Vigna angularisPhaseolus vulgaris33.9425.5595.793forward
CNT30631678Vigna angularisVigna unguiculata33.9420.6796.7793forward
CNT30709509Vigna angularisGlycine max49.2721.6789.63135forward
CNT3087387Vigna angularisVigna radiata42.77.1284.62117forward
CNT30620288Vigna angularisCajanus cajan27.0116.5991.8974forward

Expression of CNT30176589

Peptides detected in this lncRNA

>peptide 1 (36 aa)
GNSSKSQPRFTSRKKQSVRQFSWPSSIFKIWIMIPF*

Sequence

>CNT30176589
GGGAATTCCTCTAAAAGTCAACCCCGTTTCACTAGTAGGAAGAAGCAAAGTGTAAGGCAATTCAGCTGGCCCAGTTCGATTTTTAAGATTTGGATCATGA
TTCCTTTCTGAGATTTTTGTCTCAATCTCTTCTAGCCTTTTTCCAAACTTTTTAAAGGCTTCTATGGCCCTTGAATCAGAGGTCCAATTTGGATTGTCCC
TCTGTCCAAGGTAGACCTCATCAGAAGCATGTCTTGACAATATCTCTATCACTGAAAGATCCACAAGGGCCTCA