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Detailed information on CNT30628834


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30525199Vigna unguiculataPhaseolus vulgaris93.0884.692.95511forward

Expression of CNT30628834

Peptides detected in this lncRNA

>peptide 1 (41 aa)
RRKDDLFSISPIMLLLASDALLVEETKSVEVSFFASLFIND*

>peptide 2 (69 aa)
MHYLLKKLKVLKYLSLPPSSSMIDKIQLALELCELCHHPFPLLIGFLGEEEVEEVVEQMVLHWQDLHLW*

Sequence

>CNT30628834
CTAGGAGGAAAGATGATCTATTCTCAATTTCCCCAATCATGTTGCTCCTAGCATCAGATGCATTACTTGTTGAAGAAACTAAAAGTGTTGAAGTATCTTT
CTTTGCCTCCCTCTTCATCAATGATTGATAAAATTCAACTAGCTCTGGAGCTCTGTGAACTTTGTCACCACCCATTCCCCCTCTTGATAGGCTTCCTGGG
GGAGGAGGAGGTGGAGGAAGTGGTGGAGCAGATGGTACTCCATTGGCAGGATTTGCATTTGTGGTAGCAGCAGCAGCACCAGATGGCTTAGGAGGAGGCC
TAGGCACCCTAGTAGGCCTTTTCTCAATGTGAGCAAGCTTCATCTTGCTGATGGTTTGATCTTCAACATTCTTTCCATCTTCAGATTTATCATTTGGTGT
GCCAGAAACAACTGGTTTCTCCTTAATTTGAGTAAGCTTTGATGGCAAAGATATAGGATTTCCTCTTTCAGCCTTAGTCATATTCAAACCTGAATTGTCA
CCAAACTTCTGCACTCTTGCTTTCTCTGCTTTTTCCTTAATCTGTTTTT