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Detailed information on CNT30519432


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30531005Juglans regiaEucalyptus grandis96.9645.996.871629forward
CNT3075702Juglans regiaBrassica juncea97.5694.995.551639forward
CNT30422894Juglans regiaPapaver somniferum97.6274.6895.981640forward

Expression of CNT30519432

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MKDEQLRKHLPRMFSLIKNESWGLEDDQIPS*

>peptide 2 (36 aa)
MITRRIARPSCRRRIIQISALSTFHCRIEAYNGGDG*

>peptide 3 (44 aa)
PSGVVGLRAVPASRMNATWLILPVVICLSQRLSHACVSMNQFRL*

>peptide 4 (47 aa)
MGGGAWPFLVGGAICLVNSVNERDLSLLTSYAEVTFRGQLLRGTMAA*

>peptide 5 (51 aa)
SFRSGRFTCGAGIENECYLVDPASSHMLVSKIKPCMCKYEPIQTVKLRMAH*

Sequence

>CNT30519432
CTCCTTCCGGAGTGGTAGGTTTACGTGCGGTGCCGGCATCGAGAATGAATGCTACCTGGTTGATCCTGCCAGTAGTCATATGCTTGTCTCAAAGATTAAG
CCATGCATGTGTAAGTATGAACCAATTCAGACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTATCTGCTACTCGGATAACC
GTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGAAGGGATGCATTTATTAGATAAAGGTCGACGCGGGCTTTGCCCGTTGCTCTGATG
ATTCATGATAACTCGACGGATCGCACGGCCATCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCCATTGTAGGATAGAGGCCTACAAT
GGTGGTGACGGGTAACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGCCGCGGTAATTCCAGC
TCCAATAGCGTATATTTAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTTGGGTTGGGCAGAGCGGTCCGCCCCTGGTGTGCACCGGTCTGCTCGTC
CCTTCTACCGGCGATGCGCTCCTGGCCTTAACTGGCCGGGTCGTGCCTCCGGTGCTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCA
GTATACATTAGCATGGGATAACATCATAGGATTTCGGTCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGATTAACAGGAACAGTCGGGGGCATTCGTA
TTTCATAGTCAGAGGTGAAATTCTTTGATTTATGAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGG
CTCGAAGACGATCAGATACCGTCCTAGTCTCAACCATAAACGATGCCGACCAGGGATCGGCGGATGTTGCTTTAAGGACTCCGCCGGCACCTATGAGAAA
TCAAAGTCTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGGAATTGACGGAAGGGCACCACCAGGAGTGGAGCCTGCGGCTTAATTTG
ACTCAACACTGGGAAACTTACCAGGTCCAGACATAGTAAGGATTGACAGACTGAGAGCTCTTTCTTGATTCTATGGGTGGTGGTGCATGGCCGTTCTTAG
TTGGTGGAGCGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTCAGCCTGCTAACTAGCTATGCGGAGGTGACCTTCCGCGGCCAGCTTCTTAGAGG
GACTATGGCCGCTTAGGCTAAGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACG
AGTTTATAGCCTTGGCCGACAGGCCCGGGTAATCTTTGAAATTTCATCGTGATGGGATAGATCATTGCAATTGTTGGTCTTCAACGAGGAATTCCTAGTA
AGCGCGAGTCATCAGCTCGCGTTGACTACGTCCCTGCCCTTTGTACACACCGCCCGTCGCTCCTACCGATTGAATGGTCCGGTGAAGTGTTCGGATCGAG
GCGATGTGGGCGGTTCGCTGCCGGCAACGTCGCGAGAAGTCCACTGAACCTCATCATTTAGAGGAAGGAGAAGTCGTAAC