Detailed information on CNT30513539


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30609330Juglans regiaGossypium raimondii51.0742.0785.34191forward
CNT30705577Juglans regiaPrunus avium46.526082.18174forward

Expression of CNT30513539

Peptides detected in this lncRNA

>peptide 1 (61 aa)
TEPFLDITNGVTTWAAVLGSGTANSIFIWTATIDLARTIDFIYTAARLITWTIGGISTFTW*

>peptide 2 (31 aa)
MALIAQTPYVKLVSLLIYMYPSIPQSVPHEFF

>peptide 3 (95 aa)
DRALLGYHKWGNHLGSSTRFRYSKQHFHMDSNHRSGKNHRLHIYSSTSHHLDNRRNLHIHLVKEKEVVVVVVVSQVVVVAEKLRKIPWLDRKPWH*

Sequence

>CNT30513539
GACAGAGCCCTTCTTGGATATCACAAATGGGGTAACCACTTGGGCAGCAGTACTCGGTTCCGGTACAGCAAACAGCATTTTCATATGGACAGCAACCATA
GATCTGGCAAGAACCATAGACTTCATATATACAGCAGCACGTCTCATCACTTGGACAATAGGAGGAATCTCCACATTCACTTGGTGAAGGAGAAGGAGGT
GGTGGTGGTGGTGGTGGTGTCACAGGTGGTGGTGGTGGCGGAGAAGTTGAGGAAGATTCCTTGGTTGGATAGGAAGCCATGGCATTAATAGCACAGACTC
CATATGTTAAATTAGTGTCCCTTCTTATATATATGTATCCCTCGATTCCCCAGTCTGTTCCCCATGAGTTCTTC