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Detailed information on CNT3050579

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30310285	Cucumis sativus	Camelina sativa	8.54	20.55	100	45	forward
CNT3038903	Cucumis sativus	Cucumis melo	35.67	24.83	94.68	188	forward

Expression of CNT3050579

Peptides detected in this lncRNA

>peptide 1 (32 aa)
EWMKLIKPYRYHESISITQTQTPIEHFHREID*

Sequence

>CNT3050579
TTGAGTGGATGAAATTGATTAAACCTTATCGTTACCACGAATCAATATCCATCACACAAACACAAACCCCAATTGAACATTTTCATAGGGAAATAGATTG
AATTTCCATGAGGAAAGATGCAAACAGGACCGATTGATTGATAGGATAATTGAAGAACAAATCAAAGCATCATTTATTCCAATTCGAATTGGAAAGTCGG
GGAAATAAACATAGTGGGATTCAACAGACAAACCAAAACGTAAAATGGAAAAATAAGAAGGAAAAAAAAAGAGAGAAGAAAAAAATTAAAGGGGGGAAAT
TTGGTTGAAACCACCCAAGTGATGGAGCTTTAAAAAAGGCAAATGGTGGAAATTCGCCTCAAGAAAGCCTCAGCAGATGGAACTTAAGAAGAGTAGAATC
TTGGGGGCTTGTAGGCGATGAAACTGATGCACTGCACTTGACGGACGTTGTCAAAGCCAATAACCCTGATGAATGCGTAGTCACATTCCTTTGACAATTG
TTCGTTACTCATATCAGGCAGGTAAGA