Detailed information on CNT30310285


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30371763Camelina sativaArabidopsis thaliana55.2527.2596.69121forward
CNT3091618Camelina sativaSolanum tuberosum27.45.1991.6760forward
CNT30591347Camelina sativaMusa acuminata26.949.0993.2259forward
CNT30573765Camelina sativaVitis vinifera27.48.7288.3360forward
CNT3026569Camelina sativaPopulus trichocarpa23.2913.3594.1251forward
CNT3050579Camelina sativaCucumis sativus20.558.5410045forward

Expression of CNT30310285

Peptides detected in this lncRNA

>peptide 1 (72 aa)
QNDIKSKVGDNVLMFTKKQSKGGEVWKLSIGEAWGLVGDETDALHLTGVVESDDPNEGKRESQTSSFRSEATP

Sequence

>CNT30310285
CAGAATGATATAAAATCAAAGGTGGGGGATAATGTTTTGATGTTTACAAAGAAACAAAGCAAAGGGGGAGAGGTTTGGAAATTAAGCATTGGTGAAGCTT
GGGGGCTTGTAGGCGATGAAACTGATGCACTGCACTTGACGGGTGTTGTCGAATCCGATGATCCTAATGAAGGTAAGAGAGAGTCTCAAACTTCTTCTTT
CCGATCGGAGGCCACACCT