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Detailed information on CNT30504899


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30715507Nicotiana attenuataMalus domestica golden29.1828.885.3989forward
CNT30572433Nicotiana attenuataVitis vinifera26.2314.528580reverse complement
CNT3050759Nicotiana attenuataCucumis sativus20.6620.5990.4863forward

Expression of CNT30504899

Peptides detected in this lncRNA

>peptide 1 (30 aa)
PSLVTWACDPSGGNSMVGCWVVSEGWASGG*

Sequence

>CNT30504899
GCCGAGCCTTGTAACGTGGGCTTGTGACCCAAGTGGGGGCAATAGTATGGTGGGATGTTGGGTTGTTTCTGAAGGCTGGGCTTCGGGTGGCTAATGTCTG
GCCTGCCTTATCCAAGCATGGAGTTGAGCCATGTGGCCCAAACGTAAGTATGGGCTGCTTGGCTCCTAGAGTGGGGCGGACTGCGTGAGGCTGGTTTCAC
AGAGCAACGAACAACTCCCGCTCCGTGCAGTGGAAGGATAACGGGCCGGTTCTCTCCAAGTCCAACAAAAACCTAATGGGCTTCTCCAATTAAACCACCA
ATTTT