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Detailed information on CNT30502422


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3092889Nicotiana attenuataSolanum tuberosum96.3896.3884.64293forward
CNT30233957Nicotiana attenuataBrassica oleracea27.327.4885.5483forward

Expression of CNT30502422

Peptides detected in this lncRNA

>peptide 1 (61 aa)
PSQVTWACYLSGGTELVGCWADSEGRTLWAIIWPALSKRRVGLRGPSEDMGCLAPKEGRNA*

>peptide 2 (31 aa)
MREAGFTEQRTASALCSGRITGQCSQRPTKA*

Sequence

>CNT30502422
GCCGAGCCAAGTAACGTGGGCTTGTTACCTGAGTGGGGGCACTGAATTGGTGGGATGTTGGGCTGACTCAGAAGGTAGGACATTGTGGGCTATTATCTGG
CCTGCCCTGTCCAAGCGTAGAGTTGGGCTACGTGGCCCAAGTGAAGACATGGGTTGCTTAGCTCCTAAAGAGGGGCGGAATGCGTGAGGCTGGTTTTACA
GAGCAACGAACAGCTTCCGCTCTGTGCAGTGGAAGGATAACGGGCCAGTGTTCACAGCGTCCAACAAAAGCCTGATGGGCTGCTCCAATTAAACCACCAT
TTTT