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Detailed information on CNT3092889


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30502422Solanum tuberosumNicotiana attenuata96.3896.3884.64293forward
CNT30509378Solanum tuberosumSolanum lycopersicum101.3299.6887.34308forward

Expression of CNT3092889

Peptides detected in this lncRNA

>peptide 1 (80 aa)
MRALMWWNVGLIQKVGLCGLFTGLPYPSIELGHVAQANAWAAWLLKWGGPREAGFTEQRITSALCSGRIMGQCSLSPTKA*

>peptide 2 (61 aa)
PSFVTWACNLNEGINVVECWADPEGWTLWAIHWPALSKHRVGPCSPSECMGRLALKVGWTA*

Sequence

>CNT3092889
GCCGAGCTTCGTAACGTGGGCTTGTAACTTGAATGAGGGCATTAATGTGGTGGAATGTTGGGCTGATCCAGAAGGTTGGACTTTGTGGGCTATTCACTGG
CCTGCCCTATCCAAGCATAGAGTTGGGCCATGTAGCCCAAGCGAATGCATGGGCCGCTTGGCTCTTAAAGTGGGGTGGACCGCGTGAGGCTGGTTTCACA
GAGCAACGAATAACTTCCGCTCTATGTAGTGGAAGGATCATGGGTCAGTGCTCACTGAGTCCAACAAAAGCCTGATAGGCTGCTCCAACTAAACCATCAT
TTTA