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Detailed information on CNT30488696


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30728131Olea europaeaCorchorus capsularis31.7133.9682.97182forward
CNT30126429Olea europaeaCorymbia citriodora35.3739.7383.25203forward
CNT30113624Olea europaeaFicus carica2316.8682.58132forward

Expression of CNT30488696

Peptides detected in this lncRNA

>peptide 1 (70 aa)
MLKKSKMVYPSLPRVSSMSGRIQLVQELDELCHHFQPILKDFLEEVVEVAYLVLHLKCLYFYQQEHLLMV*

>peptide 2 (39 aa)
NDDLFSISPIMLLLESEVLDVEEIKDGVSFFASRFINVW*

Sequence

>CNT30488696
GGAATGATGATCTGTTCTCTATCTCCCCAATCATGTTGCTTCTAGAATCTGAGGTGCTTGATGTTGAAGAAATCAAAGATGGTGTATCCTTCTTTGCCTC
GCGTTTCATCAATGTCTGGTAGAATTCAACTAGTTCAGGAGCTCGATGAACTTTGTCACCACTTCCAGCCAATCTTGAAAGACTTCCTGGAGGAGGTGGT
GGAGGTGGCATACCTGGTGCTCCACTTGAAGTGTTTGTATTTTTATCAGCAGGAGCACCTCCTGATGGTTTAGGAGGTGCTCGAGGGACCCTAGGAAGTC
GCTTCTCAATTTGTGCAAGTTTCATTTTGCTCACTGTAGTAGAATCAATTTTGTTATCATTTGACTGGTCACCTGAGTCACCAGATGCAACTGGTTTTTC
TTTTATTAGAGTAAGTTTTGGAGGCAAAGTCACCGACTTATCTTTATCTGCCTTAGAAGGGTCACCAAACCTTGCTGCTCTTGCTTGTAGAGCTTTTTCC
TTGATTTGCTTTTCTCTTTCCAAAGCCAGCTTATGCCTATCTTTATATGCAGGATACTTCTCCTCTAGAACTCC