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Detailed information on CNT30478244


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30372943Arabidopsis halleriArabidopsis thaliana22.668.7389.81206forward
CNT30342067Arabidopsis halleriEragrostis tef7.720.7787.1470reverse complement

Expression of CNT30478244

Peptides detected in this lncRNA

>peptide 1 (68 aa)
MRHPPTSCSTKFLNQNISPTEIRLSPPELWDQFRLLREVSRSLEDQWSVMRLFYLCGSFFVNLDAYST*

Sequence

>CNT30478244
ACGGGTTCAACACTAGTATAGAATAATTCACGCTCGTGTCTTGTTCAAGTTTCGAACAGATGTGAGCGTATCCATTGGATTTATTCGTTATCCGATTGAT
ATAGTGATTCATGAGGCACCCGCCCACCAGTTGTTCGACGAAATTCCTAAACCAAAATATTTCGCCCACAGAGATTAGATTGAGTCCACCTGAATTGTGG
GATCAGTTTCGTCTTCTGCGCGAGGTTTCGCGGAGTTTGGAGGATCAGTGGAGCGTGATGCGTTTGTTCTACTTATGTGGCTCATTCTTTGTGAACCTGG
ATGCTTACAGTACATGATGGTCCTCTCTATATGAAGGGTACTGGTTAAAAAGATTTATTGATGGGACGTGATATAGCGATCTGCGATAAAACTAGGACTT
AATAGAGATCTGATTTCCGAGGCAATTGTCTGCTTGAATTTAGAGCAACTACGTATAAAAAGTCAATGGGGCATTCCGAGAATCGAACTCGGGACCTCTC
GCACCCAAAGCGAGAATCATACCACTAGACCAAATGCCCTGAAATTTAGCCTTGGGGGTTTCTTTACCTTTTGAGGATTATATTTGTGATGAAGCTGGCA
AAATGCACTCATTCGTTGTGATCCGGCTGCTTATAAAACTTGATGGTCCTCCCTATGTGAAGATTACTGGTTAAGATTTATTACTTTGGATGTGAAAGAG
CGGAAATTTACTCTTGGGGATTTACCTTTCGAGGATTCTATTCGTGATGAAGCTGGCAACATGCATTAAGGTCAAACTGTTTTTGATTTTATAATTGAAT
ATGACATTAGAATGTTTTCTTGTTAAGATAATTTAAGAAAGAAATAACGCTTTAGATCTAGTTCTATCAGTTGACTTTCAGGGCTTAATAGTAAAAGTGG
ATTGTCTGT