Detailed information on CNT30469276


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30383Saccharum spontaneumZea mays28.8431.786.74445forward
CNT30366517Saccharum spontaneumSorghum bicolor98.6459.1884.951522reverse complement

Expression of CNT30469276

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MPLRYRYIVLIYKYFAPFQIIGGFVKLHHSVLFWKKIWKSYIAWCLWVNVCFT*

>peptide 2 (53 aa)
MLPPKYIVILNIELVNLLITQVLIPSAFLHLRVTHVKIFKCNICRYCLSETLCG

>peptide 3 (45 aa)
MMFMAPVVLLKSLDQNQKTGYASQFSCAFGAHTINGGVIGCLTNL*

>peptide 4 (40 aa)
MLQVPFYSSLFTYKHEKMLPSNMNSNGVLHPENVMAYKMR*

>peptide 5 (31 aa)
MCFWRSHYQWWCNRLPYKPMTLKAIYKISAF*

>peptide 6 (29 aa)
MMKGNQFMKCLFQICDFYLGVNIVYQYSR*

>peptide 7 (55 aa)
MQPCLFGLPRSFWTFQKPKSSEKASELLGFWLLGAVWLLESPKASSLKVAKSSNK*

Sequence

>CNT30469276
CTGCACTGAAGCAGGAGAGGAACGGTGGGAAAGAAAAAAAGTAGAGGCCACCTCCAGAGTCCCGAGGGGGATTGAGGGGAGAATTTGAGGGCCTTTTACT
TTTGGGAACCTGAGTAGGGTCCTGCTAGAGTGGGTTTTTTGCCATCCAGCTCCCAAAAGCAGTATAGGGGCCCAAGTAGGGGCTCTGCTGGAGATGCTCT
AACACAAATTTGTTTGTGGTAATGTATTTATCATCCTTGTTTACTTATCAAAATATGTTTGCTCACAAGATAACTTGATCTGAACTTTCAGTGCTCCTTT
AAACATGTTGCAGGTACCATTTTATTCAAGTTTATTCACTTATAAACATGAGAAAATGTTACCATCTAACATGAACTCAAATGGAGTGTTGCATCCTGAA
AATGTTATGGCATATAAAATGAGATAATTGTGAAAATGTTATCTGTAGCATAGGAATTAGTACACCCATGATATTTGTGCTGTACATCTTGAGTAACTGC
TCTCATCACAGTTGAGAATAGTTGGTCTAAAATGCAGCCCTGTTTGTTTGGGCTTCCTAGGAGCTTTTGGACCTTTCAAAAGCCAAAAAGCTCTGAGAAG
GCAAGTGAGCTTCTGGGCTTTTGGCTTCTAGGAGCTGTTTGGCTTTTGGAAAGTCCAAAAGCTAGTAGTCTAAAAGTGGCCAAAAGCTCAAACAAATAGG
GAACCAAGATGCCACTGCGATATAGATATATCGTTCTAATTTATAAATATTTTGCACCTTTTCAAATTATTGGTGGTTTTGTAAAGTTACACCATTCTGT
ACTATTTTGGAAAAAGATATGGAAAAGTTACATTGCTTGGTGCTTGTGGGTTAATGTTTGTTTCACTTAAACCTGACTAGTTTAGAACCACCTTCATCCT
GGTTGTGGTTGAGATGATCAGAACCTGGAGCCAACAGCGTGTGTCCAACAGAAGTTCTTGATGATGAAAGGTAACCAGTTTATGAAATGTTTGTTTCAGA
TTTGTGATTTCTATTTGGGGGTCAACATAGTCTATCAATATAGCAGATGATGCTTCATAGCGGCTACATTATGCAGCGTTGGAGTCATTTGCAGTTATTA
CCATGATGTTCATGGCCCCTGTTGTTTTGCTTAAATCCCTAGATCAGAATCAAAAGACAGGATATGCCAGTCAATTTTCATGTGCTTTTGGCGCTCACAC
TATCAATGGTGGTGTAATAGGTTGCCTTACAAACCTATGACTCTTAAGGCAATTTACAAGATATCTGCCTTTTAGAAAACCTGTCTTTAGCTACTACCTA
TTGGCAGACAGACCACATATGGTAGCTAAACCACAGTAAATTTAGTCACTAACTATTTTTCTTACTCTGATTCAGTAATACATGCTACCACCAAAATATA
TAGTGATATTGAACATTGAACTTGTTAACTTATTAATCACCCAAGTTTTAATTCCAAGTGCATTTTTGCACTTACGCGTTACGCATGTGAAAATTTTCAA
ATGTAACATTTGCAGGTATTGTCTAAGTGAAACTTTATGTGGA