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Detailed information on CNT30366517


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONZMAT000495, E-value = 3e-51

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30469276Sorghum bicolorSaccharum spontaneum62.05103.4384.711596reverse complement
CNT30383Sorghum bicolorZea mays33.1660.7586.05853reverse complement

Expression of CNT30366517

Peptides detected in this lncRNA

>peptide 1 (52 aa)
MLDGNILMFMYVGEEYKSEQNLNKNGTYNMFKRAKFRSSNLVSKHILISKQG*

>peptide 2 (51 aa)
MLTPNRNHKTETNISYTGYLSSSRTSAGHTHYCWLQVLIISTITRMNVVIN*

>peptide 3 (47 aa)
MPANVTFENFHRRRKHKNALGIKSCVINKLTSSMFHITIYFGGSMYY*

>peptide 4 (32 aa)
MNIMVITANGSNLHNVAAMKHHLLYSNYVDPK*

Sequence

>CNT30366517
CAATGTAATGTGCAGCTCAAGGCTGTTGAAATGGATAACAACATCCACAATTTGATCACAATTCATTAGATTACATGCATTTTCTGCTGGTATAAACAGA
TTGTTAACATGTTGATTCAGCCAAATTAAAACACAAACCATAATTAAATTCTCAATTGAATATACAGCTCCATTTTCAGGTGGTAGGCAAGCTCTTAATA
AACTAATCAAGCAAAATCCGGACACAGGTCTTGACAGTTCTTGAATGTTGCCTTGATCAGAACATGTTCTGGCCTCCAATATAGGCTTTGCAGTTACAGA
GCTTATCTGCACTGACCCTGGTGGCAACAAGTGTTATCTAACAATATTTGGGGAGATGGAGAAATAGCTTCTGGATGTTTGTTAATGAGAAGCTGAAATT
TGGCTTCTGAGAAATAGGGCACCATGGCATACCAATGAATAGAAAGAATAACATCCCTTGCCTTATCAATTCATAAACAATAATCTGAAACACTCTAATA
TCAGAACCAAACAATGTTGTCATATATGCAAAAGGATCCATAGCCTAGTAGTTGACTCCAGCACCTAGATACAACTCCCCATGGAGCAATTTTAAGGGTA
GTTAAAAAAACTCTCGCTAGCAAACCCATAAAATAGTCATATTATCATCATCAATGTGGCAAATGATTCTGATCGCTGCAGCCACTAAGTGCAGTAGAGA
AATTATCTAGAGGACATTTAAGTTGGTAAAGAAATATTTGTGTAATTATCAAACTGCCAGTTGAAGACAATTGTAGTCCCTCTTCGTTATAAAGTATAAA
AAACCATCTAACTTCAGTTGCATTGAACAGTACAGCAGAGGCAACTTGCTGATTTGTTTCCTTGACCAAAAGAACTGCATCCAAAACATTATCGGTGGAG
GATATGGTTTTGAGCATATCTTGACAATGTAACAATACTACAAAGAAAAAAAAACTAGTGACACAGCTGCAAAAGAAGAACCATCCAGCAAAAGTTCAGA
TCTAACTAATGATATGAATCAAATATCTCAACTATTTTCCCACAAAAAGTTTCACTTAGACAATGCCTGCAAATGTTACATTTGAGAACTTCCATAGGCG
GCGTAAGCACAAAAATGCACTTGGAATTAAAAGTTGTGTGATTAATAAGTTAACAAGTTCAATGTTCCATATCACTATATATTTTGGTGGTAGCATGTAT
TACTGAATCAGAGTAAGAAAAATGACTAAATTTACTATGGTTTAGCTACCATATGTGGTCTGTCTGCCTTTAGGTAGTAGCTAAACACAGGTTTTATAAA
AGGCAGATCTCTTGTAAAAAAGAGCTATAGGTTTGTAAGGCAACCTATTACACTGCCATTTATAGTGTGTGAGCGTAGACCAAGCCAAAAGCTCATGAAA
TTTGACTGGCATGTCCTGCCTTTTGATTCTGATATAGGGATTTAAGAAAAACAACAGGGGCCATGAACATCATGGTAATAACTGCAAATGGTTCCAACCT
GCATAATGTAGCCGCTATGAAGCATCACCTGCTATATTCAAACTATGTTGACCCCAAATAGAAATCACAAAACTGAAACAAACATTTCATATACTGGTTA
CCTTTCATCCTCAAGAACTTCTGCTGGACACACACATTATTGTTGGCTCCAGGTTCTGATCATCTCAACCATAACCAGGATGAACGTGGTAATAAACTAG
TCAGTTTTAAGTGAAACAAACATTAACCCACAAGCACCAAGCAATGCAACTTTTCCATATTTTTGTCCAAAATAATTCAAGATGGTGTAACTTTACAAAA
CCACCAAGAAAATTATTTTGAAAAGGTGAAAAATATTTATAACTTAGAGCAATATATCTATATCGCAGTGGCATCTTGGCGCCCTGTTTGTTTGAGCTTT
GGGCCACTTTTGGACTTTCTAAAAGCCAAACAGCTGCTAGAAGCCAAAAGCCCAGAAGCTCACTTGGCTTCTTGGAGCTTTTTAGCTTTTGAAAAATCCA
AAAGCTCCTAGGAAGCCCAAACCAACAGGGCTGCATTTTAGACCAATTATTCTCAACTATGCTGAGAGCAATTTACTCAAGATGTACAGCACAAATATCC
CAATTCCTATGCTATAGATAACATTTTCAGAATTTTCTCAATTTATATGCTATAACATTTTCAGGATGCAACACTAAGTTCATGTTAGATGGTAACATCC
TCATGTTTATGTATGTAGGAGAAGAATACAAAAGTGAACAAAACTTAAATAAAAATGGTACATACAACATGTTTAAAAGAGCAAAGTTCAGATCAAGTAA
TCTTGTGAGCAAACATATTTTGATAAGTAAACAAGGATGAGAAATAAAGTTTGTGTTAGCGCATCTCCAGCAAGACCCCTATACTACTTTGAGAGCTGGA
TAGCAAAAAACCCACTCTAGCAGGACCCTAATCAGGCTCCAAAAAGTAAAAGGCCCTCAAATTCTCCCCTCAAGCCCCTTCATTCATAGGGACTCTCGAG
GTCACCTCTACTTTTTTGTCTTTCCCACCATTCCTCTCCCTCTTCAGTGCAGATCCCACCCACACTCGCCAG