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Detailed information on CNT30439932


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30630888Aegilops tauschiiVigna unguiculata23.1914.1884.3896forward
CNT30570681Aegilops tauschiiVitis vinifera22.956.9585.2695forward
CNT30174623Aegilops tauschiiVigna angularis23.1911.2786.4696forward

Expression of CNT30439932

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MSKEFLPVNLTSMGLTFLPMLRKFCPTPCLPALTFSG*

Sequence

>CNT30439932
CATCAAATTACCATGTACATATAACCTGATGCATCATTATCACCGATCGAATCCATCATTCAAACTCGACAATTAAAATTACAGGACGTCCATCATCATC
GCCACCCGCCAATAACTACCGGTCGATGAACTAGCACGTACGCATATACGACGTACGAGATTAGATGTCGAAGGAGTTCTTGCCGGTGAACTTGACCTCG
ATGGGGCTGACGTTCTTGCCGATGCTGCGGAAGTTCTGCCCCACGCCCTGCCTGCCGGCGTTGACCTTCTCCGGGTAGACGCCGTCCTTGGGGTGGAGGT
ACTGCACCTCGCCGTTGGGGAAGACGCGGTAGAACTGGTAGGCGATCTTGTACTTGGAGCGGAGGCCACACGCGCGCGCGGGAGATGGAGTGGTGTCTGG
TGGGTGATGAGTAG