Detailed information on CNT30391997


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30192677Triticum turgidumSecale cereale19.8473.4683.73418forward
CNT30308069Triticum turgidumTriticum aestivum9.5997.5893.56202forward
CNT30439292Triticum turgidumAegilops tauschii23.4523.8197.98494forward

Expression of CNT30391997

Peptides detected in this lncRNA

>peptide 1 (92 aa)
RSSSLPALPRPRLHCRLRVCDPQRRLGGEEPCDDLDDACSPDHNHCVQESHMDWGYVPRFRFKGAIFEHLYINYRGSQVDMDRTMIKCILVL*

>peptide 2 (72 aa)
MLDGKIGQQSLHGSMISHTVLFASKAWRTLDKNTPTILVMGISTYLFWPHFPNTLVIVSFRVFLLVSHPNTS*

>peptide 3 (42 aa)
MVVIIAQRCEEKEEYSDFSICGYIFWINNRRVNCKKKHDDHQ*

>peptide 4 (34 aa)
MLAKTVNMFVPVHRPHLRRACLMAKSGNNHCMDR*

>peptide 5 (39 aa)
MMIVTKDVSCRSNHYVSAPIIKISAPELQHNFCHLELHL*

>peptide 6 (48 aa)
MVSVSYFFHYRSNNLSSYLPDILFLDCLALGLRSSTILLYDIRKKIEF*

>peptide 7 (59 aa)
ILLLAGASAATSPLPPPRVRPSTTTRWGGALRRPRRRLLPRPQPLRPRKPHGLGICTSV*

>peptide 8 (84 aa)
DPPPCRRFRGHVSTAASACATLNDDSVGRSPATTSTTPAPPTTTTASKKATWIGDMYLGLGLKGQSLSICISTIEDLKLTWTAL*

>peptide 9 (43 aa)
MKSSGMEMVDRFCKLLSTILSVCFLHYFPVLLQYYSRTYLPAY*

>peptide 10 (31 aa)
MWSIHITATTCLLKQLICSSPYIGHIFGEHA*

Sequence

>CNT30391997
AGATCCTCCTCCTTGCCGGCGCTTCCGCGGCCACGTCTCCACTGCCGCCTCCGCGTGTGCGACCCTCAACGACGACTCGGTGGGGAGGAGCCCTGCGACG
ACCTCGACGACGCCTGCTCCCCCGACCACAACCACTGCGTCCAAGAAAGCCACATGGATTGGGGATATGTACCTCGGTTTAGGTTTAAAGGGGCAATCTT
TGAGCATTTGTATATCAACTATCGAGGATCTCAAGTTGACATGGACCGCACTATGATCAAGTGCATTCTGGTGCTATGATGATTGTGACAAAAGATGTTA
GCTGCAGAAGCAATCACTATGTCTCAGCTCCAATAATAAAAATCAGTGCACCTGAATTACAACACAATTTTTGTCATCTGGAACTGCACTTATAAGGTGT
TTGGTCTGAAAGCTACACTCCTGAATACAATGTGATATAAAAGGTTCATGAAATCATCAGGTATGGAAATGGTTGACCGTTTTTGTAAATTACTTAGTAC
TATATTATCAGTTTGTTTTTTGCATTATTTCCCAGTTCTCTTGCAGTACTATTCAAGAACCTATCTTCCTGCCTACTAGATAAAAGAGGGGTTTTGTTTA
CTTAACATGGTTGCCTGATTAACATAGTCATGGTTTCTGTTAGTTATTTTTTCCACTACCGTAGCAACAACTTATCTTCCTACCTACCAGATATACTATT
CCTTGATTGCTTAGCTCTCGGCTTAAGAAGCTCCACCATTCTTTTATATGATATTAGAAAAAAAATTGAGTTCTAACTTTGTTGAAAGACACACACAGTT
CTGATGTTCTGGGGCCAATGTTCATTTCTAGAGGCAAACACTCTCGGATTTCTTAGTGAACTATAATCCCATCTAGATAACCCCCCTCGATATAGCTCCC
TTTATTTGCATGACACAATCTAGCATATGACGGCTATGATTTGGATTGTGCGTGTTTCTCCAAAAACTAGGATTATATGCCTGAGAACAAACAAATAACG
TTATAAACTTACCTCAAAGCCTATGGGTTGACTGAAGCTTGATAAATAGTTTCAAATGCACTATGGTCTCATAACAGTACAAATAAACTTCGAGGGAAAG
AGAACCATAAGTATAGGTGACTGCATAGTAGAAGACGTGTAATTGTGTTGCACTATACTGTCTTTATAGAAGCCGACAAAATCAGAGACATCCTAAATTT
GGTTTTCTGTTCTTGTCAGTTAAGAAAAGAAACATTAACTCTTGGATTATCGGTAAGGGAATATGCCTTATTAGCATACTCTTATGGTGGTTATTATTGC
TCAACGTTGTGAGGAAAAAGAAGAATATTCAGATTTTTCTATTTGTGGTTATATCTTTTGGATAAACAATAGAAGGGTAAACTGCAAAAAGAAACATGAC
GACCACCAGTAGTTATATCTTTATTTTGAATTAAACTAAAGTTGTCATGATAGCAATATTTTAGAATATTCAGATTTTTTCAAGATTTATGGTGATTATC
ACATTAACTCTGAAACTGAACTATTCGTGTCGGGCCAGAGAAGCATAATTTCAATACAAACTGCAATTGCTTGGGCAAGAGAAATCAACTCAATACTACA
ATTTTCCATATGATGTAGTAAGAGGGGGCGTACATTGTAAACCGATGTAGGGTGAAGGCTAGCCGCATCTTTGGCGTGTGGTCAAACCCGACAAGCTGCA
ACTATGTGGAGCATCCACATTACTGCCACCACATGCTTGCTAAAACAGTTAATATGTTCGTCCCCGTACATCGGCCACATCTTCGGCGAGCATGCTTGAT
GGCAAAATCGGGCAACAATCACTGCATGGATCGATGATATCCCACACGGTCTTGTTTGCATCAAAAGCGTGGCGCACTTTGGATAAGAATACACCAACCA
TTTTGGTAATGGGCATCTCAACATATCTATTTTGGCCTCATTTCCCTAACACGCTAGTAATTGTCTCCTTTCGTGTATTTCTCTTAGTCTCACACCCAAA
CACTTCATGATCTGAGAGAGGGAATGCCAACAGCCATGGCGGCAGTGTCCCCTCCGTCCGTTCATGCAACTTGAGAGGCTCTAGCGATGACGCGTAAGAG
GCATCGG