Detailed information on CNT30438010


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30187262Aegilops tauschiiSecale cereale20.3258.5997.65341forward
CNT30294425Aegilops tauschiiTriticum aestivum80.3387.8799.931348forward
CNT30655746Aegilops tauschiiTriticum dicoccoides3.4625.6689.6658forward

Expression of CNT30438010

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MDRVVVYVLFEFHLVISGFDHLIQKIIYCLLLKCVKLKSVIEKD*

>peptide 2 (40 aa)
MACASAWLAPAPRRPMTPHASPSSTTGHPSLRSRRRDASN*

>peptide 3 (68 aa)
MFPGFQGAPAHRRHASSALRARTNRSPLQVRQHRRVDDEGGDCGGERRELVAMGLGGTALVSGDRGGS*

>peptide 4 (47 aa)
MDKSLSDAPGSNGPHVARLTHVPHSSSRTLLSHALTPLSPLPHSDLI*

>peptide 5 (71 aa)
IVNMSILILVDYDQLKWSKYHTCILRSDWSRGLSRGSWINHCRMLLDPTARTSPVSPTSRTPPLAPFSPTH*

>peptide 6 (70 aa)
MTTMAGGANLHGTGRHQGDGALSPLPRNLPPSANRAPATMTRQRCRKPRGAVHLVVCHALPGATSPTRLL*

>peptide 7 (87 aa)
MPPLLSGLGPIARPFRSGSTAASTTKVVTAAASGASWWLWDSAARLSSAVTEAVLRRAERASSPSPKSRPFNAFHFEQPAHQRCRSA*

>peptide 8 (29 aa)
MGRVATKEMELFLPYHATSLPAPIERRLP*

>peptide 9 (36 aa)
MFYYSPIHIIDMKLDFGLHSSKVGVQGTPGEESLSK*

Sequence

>CNT30438010
AAATAGTTAACATGAGCATCTTAATTTTAGTCGATTACGACCAATTGAAATGGTCAAAATATCATACCTGTATACTGCGTTCTGATTGGTCCAGGGGCCT
CTCACGCGGATCATGGATAAATCACTGTCGGATGCTCCTGGATCCAACGGCCCGCACGTCGCCCGTCTCACCCACGTCCCGCACTCCTCCTCTCGCACCC
TTCTCTCCCACGCACTGACGCCCCTCTCTCCTCTCCCTCACTCTGATCTGATCTGAATCCACCGTCGCCCACCCCCACCGCCACCCACCGTCGCCCACCC
CCACCGCCACCCACCGTCGCCCACCCCCCCTCCGCCGACGACCCTCACCATCGAGCCCACGCCCAGATCCGCGCTCTCTAGTACTCGCCCGCAACCCTCA
CCCGTGGCTAGGGTTTCGGCCGCCACCCCTAAATTCGTCGGGATCTGCCACATCCAGCGACAGCGAGGCCAGAGGTGGCCGGATCTGGCACCGGTGGATG
GGATGACGACGATGGCAGGAGGGGCGAACCTCCATGGGACGGGTCGCCACCAAGGAGATGGAGCTCTTTCTCCCCTACCACGCAACCTCCCTCCCAGCGC
CAATAGAGCGCCGGCTACCATGACGCGACAGCGCTGTCGCAAGCCTCGCGGGGCTGTGCATCTCGTCGTCTGCCACGCCCTACCAGGAGCTACATCACCC
ACACGTCTCCTCTGAAGAAGGGGACGATGGCTTGTGCGTCGGCGTGGTTGGCTCCAGCTCCCCGCCGACCTATGACTCCACATGCGTCGCCGTCTTCGAC
CACAGGTCACCCATCCTTGAGGAGCAGAAGGAGGGACGCATCTAATTGACGATCAAGGGCCTGCTCTGCTCCTCTTCTTCCTTGACCATCGGTACCACCA
TGTTCCCGGGCTTCCAAGGTGCGCCAGCACACCGCCGCCATGCCTCCTCTGCTCTCCGGGCTCGGACCAATCGCTCGCCCCTTCAGGTCCGGCAGCACCG
CCGCGTCGACGACGAAGGTGGTGACTGCGGCGGCGAGCGGCGCGAGTTGGTGGCTATGGGACTCGGCGGCACGGCTCTCGTCAGCGGTGACAGAGGCGGT
TCTTAGGCGAGCCGAGCGTGCCTCCTCCCCGTCCCCAAAATCGCGTCCCTTTAACGCGTTCCATTTCGAACAGCCGGCGCATCAGCGTTGTCGGAGCGCA
TGATAGACTACTAAATGGACAAGTATCTGCAACGTTCAGCGTCGAAGATGATGCTTACCAGATGTTCTACTACAGCCCCATCCATATCATCGACATGAAG
TTAGATTTTGGCCTTCATTCGTCAAAAGTTGGTGTACAAGGAACTCCAGGTGAAGAATCTTTAAGTAAATAATTTATATAGATCAGGATCTTATGTTGTC
GAGGTGGCTGCTGTTGTGACCAAAGATCAGCCTGGAGATGTGCATCATAGTTTTAGTTGATGTTGCCACTATGTTTTGGTGCATGTGTATTTGATTGTAT
GTACACTTGATGGACCGTGTAGTCGTGTACGTGCTGTTTGAGTTTCATTTAGTGATTTCTGGATTTGATCATTTAATTCAGAAAATTATATATTGTTTGC
TGTTGAAATGTGTAAAATTGAAATCTGTGATTGAAAAAGATTGAATGTTCTATTGGATCGAATAATATTTGGGCTCTA