Detailed information on CNT30294425


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30438010Triticum aestivumAegilops tauschii85.9278.5599.921318forward

Expression of CNT30294425

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MGRVATKEMELFLPYHATSLPAPIERRLP*

>peptide 2 (70 aa)
MTTMAGGANLHGTGRHQGDGALSPLPRNLPPSANRAPATMTRQRCRKPRGAVHLVVCHALPGATSPTRLL*

>peptide 3 (87 aa)
MPPLLSGLGPIARPFRSGSTAASTTKVVTAAASGASWWLWDSAARLSSAVTEAVLRRAERASSPSPKSRPFNAFHFEQPAHQRCRSA*

>peptide 4 (44 aa)
MDRVVVYVLFEFHLVISGFDHLIQKIIYCLLLKCVKLKSVIEKD*

>peptide 5 (68 aa)
MFPGFQGAPAHRRHASSALRARTNRSPLQVRQHRRVDDEGGDCGGERRELVAMGLGGTALVSGDRGGS*

>peptide 6 (36 aa)
NGPHVARLTHVPHSSSRTLLSHALTPLSPLPHSDLI*

>peptide 7 (40 aa)
MACASAWLAPAPRRPMTPHASPSSTTGHPSLRSRRRDASS*

>peptide 8 (32 aa)
RPARRPSHPRPALLLSHPSLPRTDAPLSSPSL*

>peptide 9 (36 aa)
MFYYSPIHIIDMKLDFGLHSSKVGVQGTPGEESLSK*

Sequence

>CNT30294425
AACGGCCCGCACGTCGCCCGTCTCACCCACGTCCCGCACTCCTCCTCTCGCACCCTTCTCTCCCACGCACTGACGCCCCTCTCTCCTCTCCCTCACTCTG
ATCTGATCTGAATCCACCGTCGCCCACCCCCACCGCCACCCACCGTCGCCCACCCCCTCCGCCGACGACCCTCACCATCGAGCCCACGCCCAGATCCGCG
CTCTCTAGTACTCGCCCGCAACCCTCACCCGTGGCTAGGGTTTCGGCCGCCACCCCTAAATTCGTCGGGATCTGCCACATCCAGCGACAGCGAGGCCAGA
GGTGGCCGGATCTGGCACCGGTGGATGGGATGACGACGATGGCAGGAGGGGCGAACCTCCATGGGACGGGTCGCCACCAAGGAGATGGAGCTCTTTCTCC
CCTACCACGCAACCTCCCTCCCAGCGCCAATAGAGCGCCGGCTACCATGACGCGACAGCGCTGTCGCAAGCCTCGCGGGGCTGTGCATCTCGTCGTCTGC
CACGCCCTACCAGGAGCTACATCACCCACACGTCTCCTCTGAAGAAGGGGACGATGGCTTGTGCGTCGGCGTGGTTGGCTCCAGCTCCCCGCCGACCTAT
GACTCCACATGCGTCGCCGTCTTCGACCACAGGTCACCCATCCTTGAGGAGCAGAAGGAGGGACGCATCTAGTTGACGATCAAGGGCCTGCTCTGCTCCT
CTTCTTCCTTGACCATCGGTACCACCATGTTCCCGGGCTTCCAAGGTGCGCCAGCACACCGCCGCCATGCCTCCTCTGCTCTCCGGGCTCGGACCAATCG
CTCGCCCCTTCAGGTCCGGCAGCACCGCCGCGTCGACGACGAAGGTGGTGACTGCGGCGGCGAGCGGCGCGAGTTGGTGGCTATGGGACTCGGCGGCACG
GCTCTCGTCAGCGGTGACAGAGGCGGTTCTTAGGCGAGCCGAGCGTGCCTCCTCCCCGTCCCCAAAATCGCGTCCCTTTAACGCGTTCCATTTCGAACAG
CCGGCGCATCAGCGTTGTCGGAGCGCATGATAGACTACTAAATGGACAAGTATCTGCAACGTTCAGCGTCGAAGATGATGCTTACCAGATGTTCTACTAC
AGCCCCATCCATATCATCGACATGAAGTTAGATTTTGGCCTTCATTCGTCAAAAGTTGGTGTACAAGGAACTCCAGGTGAAGAATCTTTAAGTAAATAAT
TTATATAGATCAGGATCTTATGTTGTCGAGGTGGCTGCTGTTGTGACCAAAGATCAGCCTGGAGATGTGCATCATAGTTTTAGTTGATGTTGCCACTATG
TTTTGGTGCATGTGTATTTGATTGTATGTACACTTGATGGACCGTGTAGTCGTGTACGTGCTGTTTGAGTTTCATTTAGTGATTTCTGGATTTGATCATT
TAATTCAGAAAATTATATATTGTTTGCTGTTGAAATGTGTAAAATTGAAATCTGTGATTGAAAAAGATTGAATGTTCTATTGGATCGAATAATATTTGGG
CTCTAAAAAGGCAATGGCCCAAACAATAGTGCAA