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Detailed information on CNT30187262

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30288579	Secale cereale	Triticum aestivum	79.04	44.23	94.78	460	forward
CNT30438010	Secale cereale	Aegilops tauschii	58.59	20.32	97.65	341	forward

Expression of CNT30187262

Peptides detected in this lncRNA

>peptide 1 (28 aa)
MDRVVVYVLFEFHLVISGFDHLIDKNIYC

>peptide 2 (50 aa)
MDKYLQRLASKMVLTRCSTAAHPYHRHEVRFWPSFVKSWCTRNSRRRIFK*

>peptide 3 (46 aa)
VFSRSGSTAASTTKVVTAAASGASWWLWDSTARLSSATTEVVVRSA*

Sequence

>CNT30187262
GTTTTTTCCAGGTCCGGTAGCACCGCCGCGTCGACGACGAAGGTGGTGACCGCGGCAGCGAGCGGCGCTAGTTGGTGGCTGTGGGACTCGACGGCACGGC
TCTCATCAGCAACGACAGAGGTGGTTGTTAGGAGCGCATGATAGACTACTAAATGGACAAGTATCTGCAACGTTTAGCGTCGAAGATGGTGCTTACCAGA
TGTTCTACTGCAGCCCATCCATATCATCGACATGAAGTTAGATTTTGGCCTTCATTCGTCAAAAGTTGGTGTACAAGGAACTCCAGGAGAAGAATCTTTA
AGTAAATAATTTATATAGATCAGGATCTTATGTTGTCGAGGTGGCTGCTGTTGTGACCAAAGATCAGCCTGGAGATGTGCATCATAGTTTTAGTTGATGT
TGCCACCATGTTTTGGTGCCTCTGTATTTGATTGTATGTACACTTGATGGACCGTGTAGTCGTGTACGTGTGTATTTGATTGTATGTACACTTGATGGAC
CGTGTAGTCGTGTACGTGCTGTTTGAGTTTCATTTAGTGATTTCTGGATTTGATCATTTAATTGATAAAAATATTTATTGTT