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Detailed information on CNT30437909


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30294286Aegilops tauschiiTriticum aestivum100.3310099.01303forward
CNT30561829Aegilops tauschiiActinidia chinensis21.8518.4992.4266forward
CNT30648233Aegilops tauschiiRosa chinensis21.8521.590.9166forward

Expression of CNT30437909

Peptides detected in this lncRNA

>peptide 1 (61 aa)
PSSVTRACNLSGGFKVVWTLLQRCGPGLDVQLLARRSKLSSGLLGPMRKLGLTGHDVAGKA*

>peptide 2 (45 aa)
MMWQGKREAGFTEQRQLPASNGGRITGCCTSGPVGPHSLLHRTTIF

Sequence

>CNT30437909
GCCGAGCTCAGTCACGCGAGCTTGTAACCTGAGTGGGGGCTTTAAGGTGGTGTGGACGCTGTTGCAGCGTTGTGGGCCTGGTTTGGATGTGCAATTGCTG
GCCCGCCGTTCCAAGTTGAGTAGTGGACTGCTGGGGCCTATGCGAAAGCTGGGCCTCACGGGCCATGATGTGGCAGGGAAAGCGTGAGGCTGGTTTCACA
GAGCAGCGACAACTGCCCGCTTCCAACGGTGGAAGGATAACGGGCTGCTGCACATCTGGGCCTGTTGGGCCTCACAGCCTGCTCCATCGAACCACCATTT
TT