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Detailed information on CNT30398389


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG83|UBIQP_HORVU, E-value = 4e-54

BLAST vs NONCODE:
NONSTUT000620, E-value = 5e-18

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30305622Triticum turgidumTriticum aestivum10095.211001293forward
CNT30688478Triticum turgidumTriticum urartu100.0869.7299.691294forward

Expression of CNT30398389

Peptides detected in this lncRNA

>peptide 1 (92 aa)
QGDGLAGEGLDKDLHTTTEPEHQVESGLLLDVVVRKGAAILELLASKDETLLVRGDALLVLDLCLDIVNGVRGLDLKGDGLAGEGLHKDLHL*

>peptide 2 (83 aa)
MRRCWSGGMPSLSWIFALTLSMVSEDSTSRVMVLPVRVFTKICICKYKADRSRLSYSTGISAVRQTIDEPDGHHATKMKLQQR*

>peptide 3 (32 aa)
RVMVLPVRVLTKICIPPRSLSTKWRVDSFWML*

Sequence

>CNT30398389
CCAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCATACCACCACGGAGCCTGAGCACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTA
GTCCGCAAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTTGCCTTGACA
TTGTCAATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATCTGTAAATACAAAGCAGACAGAAGCA
GATTAAGTTACAGTACAGGGATATCTGCAGTACGTCAAACAATAGATGAACCAGATGGCCACCATGCTACAAAGATGAAATTGCAACAGAGATGAAATCA
GCTAGAGAGCTGACAGCAAACTGCCCAGGAGCTGGCCACTAGAACAAGCCAATGGATTGACATAATATAAGAGTGTTTTTGACACTATACTAGTATCAAA
AACGCTGTTATATTATGGGACGGAGGGAATAGCATATCTACCAGCGCAGTTTCAATAGGAGCTGATGTAATCTGGTTGTACTGAGAAGCTTGTCAACAAG
CCTAGAAACCAACAGTAATATCGGCAAACCGACATGAATTTAAGAGTTGAATTCAATGCCCAACTACGGACGCTACAAGCAACTACAAAGCTGAACTATT
AATCTAGCAAATCATAGGTGTATCCTTCCACAGATCATAGGGCTACAAAATCAGAAACTAGCTAACTAAGTCTATAACGAGATAGATGAACCGAACCAAC
AGCAATCGCATCGCATCCCAGTAATACCACGAAGGTGTACCCTTCAACATATGAGGCTCATGAGCGGTACATAATCAAAAATCCACAATAACAACCAAGC
AGAACTAAGACGAACCGACCCCACAGCAATCCCATCATAATCGGCAGATCTGCTCGAAAATCACGGCATAATCAAGAGAGACGTGTTAACTACAATCAGG
CCTAATCAGCCACGACTAACCGAACGAGCTGCAATCGATCAACAGCAATAACGCCTCGACCCACCCACAGATCTACTCCAAATCCATACGACTAGCAGGA
TCGAGGGCGGTGCTAGCAACGATCGATCCAAGGGCACGCACGCACGCACGAGAGAGCGAAGAAGAAACCGTAGCCTCGCATACCTTGAGGAGGAGGACGA
GAGAGCCTTCGCTTCGCTCGGATCGGAGGTTTCCCGGTGAGATCGTAGGGGGGCTGGATTGGATTGGATCGGATCGGATGTGTGGAGAGGAGA