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Detailed information on CNT30688478


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 1e-96

BLAST vs NONCODE:
NONMTRT002043, E-value = 3e-63

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30305622Triticum urartuTriticum aestivum67.9492.8699.681261forward
CNT30398389Triticum urartuTriticum turgidum67.2496.5299.681248forward
CNT30242408Triticum urartuAvena sativa25.8164.8294.78479forward
CNT30668444Triticum urartuTriticum dicoccoides37.66100.4398.71699forward
CNT30723091Triticum urartuTriticum spelta40.6299.8795.36754forward
CNT30583297Triticum urartuEchinochloa crusgalli26.1925.2991.77486forward

Expression of CNT30688478

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MHQKYHKKPHNTTGNIRQDKQYYGLNSGLT*

>peptide 2 (34 aa)
MCGEETGGGGDFIAEPARTGGREGRSTTAPARVTC

>peptide 3 (61 aa)
MRRCWSGGMPSLSWILAFTLSMVSEDSTSRVMVLPVRVLTKICIPPRSLSTKWRVDSFWML*

>peptide 4 (83 aa)
MRRCWSGGMPSLSWIFALTLSMVSEDSTSRVMVLPVRVFTKICICKYKADRSRLSYSTGISAVRQTIDEPDGHHATKMKLQQR*

Sequence

>CNT30688478
AAATGCATCAGAAATATCACAAGAAACCACATAACACAACAGGAAACATCAGGCAAGACAAACAATATTATGGATTGAATTCAGGGCTCACTTAATATTA
AGTTCATCAAAGCTGCTGCACACCAGCAGAAGTTTGCAGATACAAACGATAACACTGCATCATAGTACGGTATAGAAACAAAGACAGTTCAGGCAACGAC
AGACATAGACCAGACTCCTTTGGAGGACACCGAAGACGAGACTTGTGAACCCAGAGACAAAAAGCAGCTCCATGGCCAGGAGCTTACTGGCCACCACGGA
GACGGAGCACCAAGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCCGCCAAGGTGCGGCCATCCTCAAGCTGCTTACCAGCAAAGATGAGGCGCTGCTG
GTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTGTCAATGGTGTCTGAGGACTCAACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTC
TTGACAAAGATCTGCATACCACCACGGAGCCTGAGCACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCCGCAAGGGTGCGGCCATCCTCGAGCT
GCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTGTCAATGGTGTCAGAGGACTCGACCTC
AAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATCTGTAAATACAAAGCAGACAGAAGCAGATTAAGTTACAGTACAGGGATATCTGCA
GTACGTCAAACAATAGATGAACCAGATGGCCACCATGCTACAAAGATGAAATTGCAACAGAGATGAAATCAGCTAGAGAGCTGACAGCAAACTGCCCAGG
AGCTGGCCACTAGAACAAGCCAATGGATTGACATAATATAAGAGTGTTTTTGACACTATACTAGTATCAAAAACGCTGCTATATTATGGGACGGAGGGAA
TAGCATATCTACCAGCGCAGTTTCAATGGGAGCTGATGTAATCTGGTTGTACTGAGAAGCTTGTCAACAAGCCTAGAAACCAACAGTAATATCGGCAAAC
CGACATGAATTTAAGAGTTGAATTCAATGCCCAACTACGGACGCTACAAGCAACTACAAAGCTGAACTATTAATCTAGCAAATCATAGGTGTATCCTTCC
ACAGATCATAGGGCTACAAAATCAGAAACTAGCTAACTAAGTCTATAACGAGATAGATGAACCGAACCAACAGCAATCGCATCGCATCCCAGTAATACCA
CGAAGGTGTACCCTTCAACATATGAGGCTCATGAGCGGTACATAATCAAAAATCCACAATAACAACCAAGCAGAACTAAGACGAACCGACCCCACAGCAA
TCCCATCATAATCGGCAGATCTGCTCGAAAATCACGGCATAATCAAGAGAGACGTGTTAACTACAATCAGGCCTAATCAGCCACGACTAACCGAACGAGC
TGCAATCGATCAACAGCAATAACGCCTCGACCCACCCACAGATCTAATCCAAATCCATACGACTAGCAGGAATCGAGGGCGGTGCTAGCAACGATCGATC
CAAGGGCACGCACGCACGCACGAGAGAGCGAAGAAGAAACCGTAGCCTCGCATACCTTGAGGAGGAGGACGAGAGAGCCTTCGCTTCGCTCGGATCGGAG
GTTTCCCGGTGAGATCGTAGGGGGGCTGGATTGGATTGGATCGGATCGGATGTGTGGAGAGGAGACGGGAGGGGGCGGGGATTTTATAGCCGAGCCGGCT
CGGACGGGAGGGAGAGAAGGAAGAAGCACCACGGCACCGGCACGGGTGACTTGTGG