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Detailed information on CNT30305622


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG83|UBIQP_HORVU, E-value = 1e-56

BLAST vs NONCODE:
NONSTUT000620, E-value = 5e-18

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30398389Triticum aestivumTriticum turgidum91.8396.441001247forward
CNT30688478Triticum aestivumTriticum urartu92.8667.9499.681261forward

Expression of CNT30305622

Peptides detected in this lncRNA

>peptide 1 (37 aa)
EDSTSRVMVLPVRVLTKICIPPRSLSTKWRVDSFWML*

>peptide 2 (83 aa)
MRRCWSGGMPSLSWIFALTLSMVSEDSTSRVMVLPVRVFTKICICKYKADRSRLSYSTGISAVRQTIDEPDGHHATKMKLQQR*

>peptide 3 (96 aa)
GLNLQGDGLAGEGLDKDLHTTTEPEHQVESGLLLDVVVRKGAAILELLASKDETLLVRGDALLVLDLCLDIVNGVRGLDLKGDGLAGEGLHKDLHL*

Sequence

>CNT30305622
GAGGACTCAACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCATACCACCACGGAGCCTGAGCACCAAGTGGAGAGTGGACTCCT
TCTGGATGTTGTAGTCCGCAAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGAT
CTTTGCCTTGACATTGTCAATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATCTGTAAATACAAA
GCAGACAGAAGCAGATTAAGTTACAGTACAGGGATATCTGCAGTACGTCAAACAATAGATGAACCAGATGGCCACCATGCTACAAAGATGAAATTGCAAC
AGAGATGAAATCAGCTAGAGAGCTGACAGCAAACTGCCCAGGAGCTGGCCACTAGAACAAGCCAATGGATTGACATAATATAAGAGTGTTTTTGACACTA
TACTAGTATCAAAAACGCTGTTATATTATGGGACGGAGGGAATAGCATATCTACCAGCGCAGTTTCAATAGGAGCTGATGTAATCTGGTTGTACTGAGAA
GCTTGTCAACAAGCCTAGAAACCAACAGTAATATCGGCAAACCGACATGAATTTAAGAGTTGAATTCAATGCCCAACTACGGACGCTACAAGCAACTACA
AAGCTGAACTATTAATCTAGCAAATCATAGGTGTATCCTTCCACAGATCATAGGGCTACAAAATCAGAAACTAGCTAACTAAGTCTATAACGAGATAGAT
GAACCGAACCAACAGCAATCGCATCGCATCCCAGTAATACCACGAAGGTGTACCCTTCAACATATGAGGCTCATGAGCGGTACATAATCAAAAATCCACA
ATAACAACCAAGCAGAACTAAGACGAACCGACCCCACAGCAATCCCATCATAATCGGCAGATCTGCTCGAAAATCACGGCATAATCAAGAGAGACGTGTT
AACTACAATCAGGCCTAATCAGCCACGACTAACCGAACGAGCTGCAATCGATCAACAGCAATAACGCCTCGACCCACCCACAGATCTACTCCAAATCCAT
ACGACTAGCAGGATCGAGGGCGGTGCTAGCAACGATCGATCCAAGGGCACGCACGCACGCACGAGAGAGCGAAGAAGAAACCGTAGCCTCGCATACCTTG
AGGAGGAGGACGAGAGAGCCTTCGCTTCGCTCGGATCGGAGGTTTCCCGGTGAGATCGTAGGGGGGCTGGATTGGATTGGATCGGATCGGATGTGTGGAG
AGGAGACGGGAGGGGGCGGGGATTTTATAGCCGAGCCGGCTCGGACGGGAGGGAGAGA