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Detailed information on CNT30387344


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30180387Triticum turgidumSecale cereale33.127.784.14372reverse complement
CNT30288453Triticum turgidumTriticum aestivum100.3640.2798.41128reverse complement

Expression of CNT30387344

Peptides detected in this lncRNA

>peptide 1 (45 aa)
NTTNYYYGFHLWTRSKQEVEYQFELKPQHLFWNGGSMNERQEREQ*

>peptide 2 (38 aa)
MGAFSTFPTIACPTSYAVAGRASATAQAMASASPELRP*

Sequence

>CNT30387344
AATACAACCAACTATTACTATGGATTTCACCTTTGGACTAGAAGCAAGCAAGAGGTGGAATACCAATTTGAACTAAAACCACAACATTTATTTTGGAATG
GAGGGAGTATGAATGAAAGACAAGAGAGAGAGCAGTGAAGAGGCATAAGGTAACCGGAAATTGTTATTGGAGCTCTGATCTTCGAAGAAAAATACAATTG
ATGGACGCAGTACACCAATAGAGATAAGGTACACTAAGGAAATGATTGAAATCTAAGTTTTAGGTTCCATACCTTTGCATATCAGAGGCTTGCAGAATTC
TTTCCAATCTTTTTGTAAAAAGGTAAAACTAGTACTCCCTTCGTCCGGAAATACTTGTCATCAAAATGAATAAAAAGGGATGTATCCTGACGGAGGGACT
ACTTAGCTCCTAAACAGACTCTAAGTAAGATACAAATAAGTAAGATAACTAGAAAGAAAGCATTGGACCGTGCGAACTGAAAGGCAATAGACAGCTAGTA
AAGCGCACAAAAACAAAAATCTGCTAGAAACACGTCCATGCAGAGGCTAACTTTGAGCTCGCCCTCATGCCGGTGAGAACCTCTTATCATGCCCCAGAGC
GCCCACAAACAAAGCCTGTGCATGGAATGTTGCATCTTCAGTTATAGTTAACTTCTTTTCCTTCAAATTAGTTGGTCTCAGCTGATTGAATGAAACTGGA
ACTGGAACTGATTTTTACCTTATGGGTGCCTTTTCGACCTTCCCGACCATCGCTTGTCCAACCAGCTATGCCGTAGCAGGCCGTGCCAGCGCGACGGCTC
AGGCCATGGCCAGCGCCAGCCCAGAGCTGCGGCCGTAAGCCGGACGGCCGCACGGCACGCATGCAGCCGACCAAGCTTTGCTAGGCAACGGTTGCACCGT
TCTCCCCGCCGCCGCGACCGCCATATTCACGGCACACAAGTCGAGGTAGTCGGGAGGCGCACTACCGCTGCTTCCATTGTCAGCCATCAACAGCTCATAC
AGAGCTTATCCCGCTATTCTTTGGTTAGGCAGATTTTGGAAGAAGGCTCTCCCTTCGGGAGTTGGCTTTTGCATTCCGTTCTCCTCTCCCTGCCCCACTT
CCTGTATCATTGAACATGGACAGC