Detailed information on CNT30288453


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30387344Triticum aestivumTriticum turgidum40.27100.3698.41128reverse complement

Expression of CNT30288453

Peptides detected in this lncRNA

>peptide 1 (81 aa)
MCSKHRYGTMSKDAGATLMYQLATVMGIGTKKLEWITRVFNPGLDAMPVIGFQHLGVDLSGLFVLACPCVQYFPLIAKIKF*

>peptide 2 (64 aa)
MRAVRPSGLRPQLWAGAGHGLSRRAGTACYGIAGWTSDGREGRKGTHKVKISSSSSFIQSAETN*

>peptide 3 (62 aa)
MADNGSSGSAPPDYLDLCAVNMAIAAAGRTAQPLPSKAWSAACVPCGRPAYGRSSGLALAMA*

>peptide 4 (58 aa)
MPAKSCNNASAGTVLQYLDLLQKLPFFLQYLSGLSLIIQEPLLAFLQHEDKYRTKLKS*

>peptide 5 (50 aa)
MLCVANIAMEPCQKMQVLLSCTNWLQLWASEQRSLSGLPGCLILVWTPCQ*

>peptide 6 (48 aa)
MDLYPDSGLATQQFAAGACGLLVGNDSGHAAPPMFDMLDRLRCLTQGF*

>peptide 7 (44 aa)
MELNGFGSFLKTHCVVDLVRHIADMCGCSASDQILKRNNVLTNY*

>peptide 8 (44 aa)
KAQQESCPCSMIQEVGQGEENGMQKPTPEGRAFFQNLPNQRIAG*

>peptide 9 (38 aa)
ESSTGELSMFNDTGSGAGRGERNAKANSRRESLLPKSA*

>peptide 10 (41 aa)
MIRIYQAGAMPCQQRVATMHQREQYYSTWTCFKNYLFFCST*

>peptide 11 (50 aa)
MTRTLVKRVLATIQTHPNFCQSCRLPRINTKMIEHTSKTSNQRKFSSGEL*

>peptide 12 (46 aa)
MQHSMHRLCLWALWGMIRGCLYHEGELKVSLCMDVFLADFYFCALY*

Sequence

>CNT30288453
GGAAAGCTCAACAGGAGAGCTGTCCATGTTCAATGATACAGGAAGTGGGGCAGGGAGAGGAGAACGGAATGCAAAAGCCAACTCCCGAAGGGAGAGCCTT
CTTCCAAAATCTGCCTAACCAAAGAATAGCGGGATAAGCTCTGTATGAGCTGTTGATGGCTGACAATGGAAGCAGCGGTAGTGCGCCTCCCGACTACCTC
GACTTGTGTGCCGTGAATATGGCGATCGCGGCGGCGGGGAGAACGGCGCAACCGTTGCCTAGCAAAGCTTGGTCGGCTGCATGCGTGCCGTGCGGCCGTC
CGGCTTACGGCCGCAGCTCTGGGCTGGCGCTGGCCATGGCCTGAGCCGTCGCGCTGGCACGGCCTGCTACGGCATAGCTGGTTGGACAAGCGATGGTCGG
GAAGGTCGAAAAGGCACCCATAAGGTAAAAATCAGTTCCAGTTCCAGTTTCATTCAATCAGCTGAGACCAACTAATTTGAAGGAAAAGAAGTTAACTATA
ACTGAAGATGCAACATTCCATGCACAGGCTTTGTTTGTGGGCGCTCTGGGGCATGATAAGAGGTTGTCTTTACCATGAGGGCGAGCTCAAAGTTAGCCTC
TGCATGGACGTGTTTCTAGCAGATTTTTATTTTTGTGCGCTTTACTAGCTGTCTATTGCCTTTCAGTTCGCACGGTCCAATGCCTTCTTTCTAGTTATCT
TACTTATTTGTATCTTACTTAGAGTCTGTTTAGGAGCTAAGTACTCCCTCCGTCAGGATACATCCCTTTTTATCCATTTTGATGACAAGTATTTCCGGAC
GAAGGGAGTACTAGTTTTACCTTTTTACAAAAAGATTGGAAAGAATTCTGCAAGCCTCTAATATGCAAAGGTATGGAACCTAAAACTTAGATTTCAATCA
TTTCCTTAGTGTACCTTACCTCTATTGGTGTACTGCGTCCATCAATTGTATTTTTCTTCGAAGATCAGAGCTCCAATAACAATTTCCGGTTACCTTATGC
CTCTTCACTGCTCTCTCTCTCTCTTGTCTTTCATTCATACTCCCTCCATTCCAAAATAAATGTTGTGGTTTTAGTTCAAATTGGTATTCCACCTCTTGCT
TGCTTCTAGTCCAAAGGTGAAATCCATAGTAATAGTTGGTTGTATTGTCAATATTTGAAAAAAAATCTTAAGTTGCCAAAAGTTGACAATAAAATTTGGT
AGCAAACCACTAGCCATCATTTGACATTTTTGGCAAAATATTGGCATGCCAACTTTTGACATCTAACCACTGGAAAAAAAAAATTGCGCTCTATAGCATC
ATTGATAGCACGTTGTAGCGTTTTGAGCAATGTCTCTCCAAATAAACTAGTGTACAAAAGTATCTCGCTAATAGCGCATTTTAAGAGTGGCGCTATTTTG
CTATTGCAGATCATTGGGAAAGGGGTTTTGGTGAACAAATATAGACTATTTTTTTTGTCATGACCAGAACATTGGTGAAGAGGGTTTTGGCCACCATCCA
AACACACCCTAACTTCTGCCAATCATGCCGGTTACCTAGGATCAACACAAAGATGATCGAGCATACCAGTAAAACTAGCAATCAACGTAAATTTAGCTCA
GGTGAACTCTAGACGATACACATGGACCTCTATCCGGACTCAGGGTTGGCCACCCAACAATTTGCGGCAGGAGCCTGTGGCTTGCTGGTTGGCAACGACA
GTGGCCACGCAGCACCCCCAATGTTTGATATGTTGGATCGCCTTAGGTGTCTCACTCAGGGGTTTTAGTTTGCAGCTATCTCACAGGCCTTCGGGCCACA
GCGTGCCCACCGTTCATGGAGTTGAATGGCTTCGGAAGTTTTCTCAAGACGCATTGCGTTGTAGATCTAGTTAGGCACATCGCCGATATGTGTGGGTGTT
CTGCATCTGATCAAATACTAAAGAGAAACAATGTTTTGACAAATTATTAAGCCAAGTGGGCTTTTTTGTTCATCTGCTATTTACTTTTCTGGCGTACAGG
TTCACATAAATCTGAGATGATAAGGATTTATCAGGCAGGAGCCATGCCATGCCAGCAAAGAGTTGCAACAATGCATCAGCGGGAACAGTATTACAGTACT
TGGACTTGCTTCAAAAATTACCTTTTTTTTTGCAGTACTTGAGCGGCCTCAGTTTGATAATACAAGAACCGTTGTTAGCATTTCTACAACATGAAGACAA
GTACCGCACCAAACTAAAATCTTGACCAACTTCTATAAAAAGGACAGACCCAGTGCATAGAAGCTCCCACACAAGGTGGGGTCTGGGGAAGGATTATAGA
GTGACCAACTTCTATATATACTTCATTCAAAATAAATAAGGATGGCTATGATGGACCAGGAGGCAGAGTTCAGAGAATCTGGTGGATAGTAGTTATTGTT
TGCTCCTAGTTACTGTAATATCGATGTTATGTGTAGCAAACATCGCTATGGAACCATGTCAAAAGATGCAGGTGCTACTCTCATGTACCAATTGGCTACA
GTTATGGGCATCGGAACAAAGAAGCTTGAGTGGATTACCAGGGTGTTTAATCCTGGTTTGGACGCCATGCCAGTGATAGGCTTTCAGCATTTAGGAGTGG
ACTTGTCTGGCCTGTTTGTCTTAGCTTGTCCATGTGTTCAATATTTCCCTCTTATTGCAAAGATCAAGTTTTAATCTTCTTGTAATAAGGTTGGCTATAT
GCATCATACAATAGAGTCCGGGGTAATAAAAGCTTCCATTAGAAAAATATGAATAAAGCAGTGTTATGTATTCCAAACTACGTGCGAATGTTAATCAACA
A