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Detailed information on CNT30369492


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30364564Oryza glumipatulaSorghum bicolor20.5723.1984.4109forward
CNT30150244Oryza glumipatulaBrachypodium distachyon21.8921.8985.34116forward

Expression of CNT30369492

Peptides detected in this lncRNA

>peptide 1 (52 aa)
MMGLQTASTSLSFSSYSSFSGLLEGLLHLLLLLALQLVRQLVLVADGVLHVVH

>peptide 2 (48 aa)
MLVVDAALAVGAATGGATGPLVDGGDDGVADGLDLLELLLVLLLLGPP*

>peptide 3 (31 aa)
FTYVSSSSQFTWKSEGSSKRKSCSTLDRVTN*

>peptide 4 (29 aa)
NLLMFLLLHSSHGNQKEVAKGRAVLHSTE*

Sequence

>CNT30369492
AATTTACTTATGTTTCTTCTTCTTCACAGTTCACATGGAAATCAGAAGGAAGTAGCAAAAGGAAGAGCTGTTCTACACTCGACAGAGTAACAAACTAAGA
GAGAGCAACACAAGTAACAAGAGGGGAGATTTCTGGTGTTCTGCAAATAAAAACCCTCCTCTCTTGCTACCCCTAAACCCCAACCCAAGGTAGTAGTAAG
TCACCCCACTAAAAGTAACCGGCCATCTCTTACAAAAATTGGCTGTCTCCTTTGAATCAATCGAATCAGATCATTATCATCATCTACAGCTCGTCATGCT
CGTCGTCGACGCCGCCCTCGCCGTCGGCGCCGCCACCGGGGGCGCCACCGGTCCTCTGGTAGACGGCGGAGATGATGGGGTTGCAGACGGCCTCGACCTC
CTTGAGCTTCTCCTCGTACTCCTCCTTCTCGGGCCTCCTTGAGGGCCTCCTCCACCTTCTCCTTCTCCTCGCTCTCCAGCTTGTCCGCCAGCTTGTCCTT
GTCGCCGACGGTGTTCTTCATGTTGTACAC