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Detailed information on CNT30362697


BLAST search results

BLAST vs Swiss-Prot:
sp|P25853|BAM5_ARATH, E-value = 2e-15

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30671724Sorghum bicolorSetaria viridis9.9527.589.0955forward
CNT30392006Sorghum bicolorTriticum turgidum26.418.2580.82146forward
CNT30580795Sorghum bicolorEchinochloa crusgalli30.561892.31169forward

Expression of CNT30362697

Peptides detected in this lncRNA

>peptide 1 (57 aa)
MTPSTPASVSFFSCALVSSSFSNVLSTVMISSCMSGSQELGGKKAYREHGVDLDIVG*

>peptide 2 (33 aa)
MNVVVSLGGLFISGGRGDRSGRRRAAFLQRCKPI

Sequence

>CNT30362697
AGCACAAGTGAAGTTCATGCTTGCAGGATGCCTTGTTAGCATGTGTGCTATGGTTCTGTAGCCATCTCTGTCATCTAAGTTGTAGTATCCGGCAGTGAGC
TCAGCTGCATGACCTGCTTGTAGGCGCTCCAGTCGTAGACCCCCGGCTCCTTCCCCTCCACCAGCCCCCACCAGACGTCGATCATGACCCCATCGACGCC
GGCCTCCGTCAGCTTCTTCAGTTGCGCCCTTGTCTCGTCCTCCTTCTCGAACGTGTTGTCGACAGTGATGATATCCAGCTGCATGTCCGGAAGCCAAGAG
TTGGGGGGAAAAAAAGCTTACCGGGAGCATGGCGTAGACCTGGACATAGTTGGCTAGCGCGTTCCCCGCCATTGTGGCTGGCTACGGTCTCACTCTCAGA
GACCTCACTGGCTCGCTCTCTGCTTGGTGGTCACTGAGCTTGGAGCTTGATGAATGTTGTGGTGAGCTTGGGGGGTCTATTTATAAGTGGAGGCAGGGGA
GATCGATCTGGACGGCGACGTGCAGCGTTTCTCCAGCGATGCAAACCTATCCT