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Detailed information on CNT30359318


BLAST search results

BLAST vs Swiss-Prot:
sp|P27492|CB21_TOBAC, E-value = 8e-50

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30269178Lactuca sativaChenopodium quinoa42.9732.8384.03263forward
CNT30121647Lactuca sativaPhyscomitrium patens42.9735.1682.89263forward

Expression of CNT30359318

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MENIASLPFLISFTFNSAKASGSSASPAVSQP*

>peptide 2 (50 aa)
MDFLMAQPSWQLQSSSWKPVHFRKAQNLRDLFSLLGLRKERREPWWKQPL*

>peptide 3 (45 aa)
METRPFPKSSELEGLVFTAWPAKGEERAMVEAAIVSFLKLETKNI*

Sequence

>CNT30359318
TAACAATTAACAACTAATTGCTATTTTACCATGTGCACAAGATACCCAAAAATAGCTATATATTAATTCACAAATCATTTTACATCAAAACCCTTATTTA
GTACATTCACTTTCCGGGGACAAAGTTTGTAGCATAAGACCAGGCGTTATTTGCAACAGGGTCAGCAAGGTGGTCAGCCAAGTTCTCCAACGGCCCCTTT
CCTGTGACAATGGCTTGAACAAAGAACCCAAACATGGAGAACATAGCCAGTCTCCCATTCTTGATCTCCTTCACCTTCAACTCAGCAAAAGCCTCTGGAT
CATCTGCAAGTCCGGCGGTGTCCCAGCCGTAGTCACCTGGGAATTCACCGGTCAGGTATGATGGAGCCTCGCCGGAGAATGGGCCTAGGTACTTGACACG
GTCAGGGCCGTACCATGGACTTCCTGATGGCGCAGCCTTCTTGGCAGCTGCAGTCTTCCTCATGGAAACCCGTCCATTTCCGAAAAGCTCAGAACTTGAG
GGACTTGTTTTCACTGCTTGGCCTGCGAAAGGAGAGGAGAGAGCCATGGTGGAAGCAGCCATTGTAAGTTTTCTTAAATTAGAAACTAAAAATATTTAGA
AAGTTGGGGGCT