Detailed information on CNT30356133


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30629390Lactuca sativaVigna unguiculata24.3617.2383.7286forward
CNT30491328Lactuca sativaOlea europaea32.0120.9383.19113forward
CNT30712109Lactuca sativaGlycine max32.0121.5683.19113forward
CNT30599147Lactuca sativaFraxinus excelsior25.7828.7182.4291forward

Expression of CNT30356133

Peptides detected in this lncRNA

>peptide 1 (40 aa)
STIVKQQAQRDRNIEVDSQDISFNCSAKTYCSLKIGEALD*

Sequence

>CNT30356133
TTTCCACAATAGTTAAGCAACAGGCTCAAAGAGACCGGAACATTGAGGTGGATTCCCAAGACATTAGCTTTAATTGCAGTGCAAAGACATACTGCAGCCT
CAAGATCGGCGAGGCCTTGGATTAGGGTACAACATGGTGTCTTTGGTGGGGTTTCGGTGAAGGTGTTGGAGGTTTCGGTGACGGTGGGCACGACGATGGT
GGCGGTGGTGGGCAGCCTTTTGGGGTATGAGTGGATGTTACCAAAGTGAAAAAAAGAAGATTGAAGGTAAGGAGAAAAGCTGTTGTTGCCAAAGCTCTTG
AAGCCATTTTTAAATGCTTTGGTTTCTTACAAGTAGAAAGTGTTGTAACCCAA