« Back to Olea europaea search


Detailed information on CNT30491328


BLAST search results

BLAST vs Swiss-Prot:
sp|P14009|14KD_DAUCA, E-value = 2e-27

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30599147Olea europaeaFraxinus excelsior43.3373.8290.6234forward
CNT30356133Olea europaeaLactuca sativa20.9332.0183.19113forward

Expression of CNT30491328

Peptides detected in this lncRNA

>peptide 1 (66 aa)
MPKTLALMAVQRQTAASRSARPWIREQHGVFGGVPMVTPSNPPRRLAHTPNFKASLGQVPLPGLGLG

>peptide 2 (55 aa)
FDNKLKHGYNFDNYNMKIQASKNDGLGYRTTFTQEQSFLSYLLIREGEFPSTRMQ*

Sequence

>CNT30491328
ATTCGATAATAAACTGAAACATGGATACAATTTTGATAATTATAATATGAAAATACAAGCTAGTAAAAATGACGGCCTCGGGTATAGAACTACTTTCACA
CAAGAACAATCTTTTCTTTCTTATTTGCTCATAAGGGAAGGAGAATTTCCAAGCACAAGAATGCAATAATCTTAAAAGTACAAACTCACAAGAATGCAAT
GATCTTAACAATACAAATTCTTAGGACTGAAGACCGAAGATTATAAAACTTGGTTGCCTAGGCACATTTGAAGCCTGGTGGAACCTTCTTGGAGCAGACA
TTAAGAAGCAAGCTAAGGGAAAGAGGAACATTGAGGTTAATGCCCAAAACATTGGCTTTAATGGCGGTGCAAAGGCAGACCGCTGCCTCCAGGTCGGCGA
GGCCTTGGATAAGGGAGCAGCATGGAGTTTTTGGTGGTGTCCCAATGGTAACACCAAGCAATCCACCTAGAAGATTAGCGCATACCCCTAATTTTAAGGC
ATCCCTAGGGCAAGTGCCCCTTCCGGGGTTGGGGCTTGGC