Detailed information on CNT30629390


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9ZSP6|AIR1L_ARATH, E-value = 2e-15

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30709099Vigna unguiculataGlycine max29.4623.684.35147forward
CNT30356133Vigna unguiculataLactuca sativa17.2324.3683.7286forward
CNT30593752Vigna unguiculataEragrostis curvula22.659.4684.07113forward
CNT30174518Vigna unguiculataVigna angularis32.6759.4991.41163reverse complement

Expression of CNT30629390

Peptides detected in this lncRNA

>peptide 1 (28 aa)
MFRHNTRATFEAISHCCYKFFTLTTLWFG

>peptide 2 (35 aa)
MPKMLALRAVQRQTAASRSARPWMSSQHGVFGQVP*

Sequence

>CNT30629390
GTAAATGGCAATAGCAGCAGAGAGGGAACACTAAGTACACAGAATAGTGATGAATAACGAATATAGCAAAACAGAAAAGCTTAGGACATGGTGATTAAGT
TTATGAAAGTGTTTGTTTAATTGCAGAGGAAACCCTTAGGAGTTTTCTTTCCGCAGTAGTTGAGGAGCAAGTTCAACTTGACGGGAACATTGAGGTTGAT
GCCCAAGATGTTAGCTTTGAGAGCGGTGCAGAGACAGACGGCGGCTTCAAGATCGGCGAGGCCGTGGATGAGTTCGCAGCACGGCGTCTTTGGGCAAGTC
CCATAGTTTGTGGAAGGTGGCTTTGGCACAGGTGTGTATGGTGGGTGTTTCGGAGCTTTCGGTGGTGGGTTGCATGGCACGTATGTGCAGCTTACCACAC
TGAAAAACAAGATGTTCAGACACAACACAAGAGCAACCTTTGAAGCCATTTCACACTGCTGTTACAAGTTCTTCACTCTTACAACACTGTGGTTTGGTT