CANTATAdb - search

Detailed information on CNT30355225

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT3087851	Lactuca sativa	Vigna radiata	51.82	32.71	80.6	299	forward
CNT3017147	Lactuca sativa	Zea mays	54.42	43.92	81.53	314	forward

Expression of CNT30355225

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MVMLGCRKERSGCKRVRLGCRRVRLGCRMVMSGCRKERSGCKLAM*

Sequence

>CNT30355225
ATTGGTACCTGTAGTTGGGGGATGTAGGGCTGTATGGACTACTAGGAGAATAAGCCAACGAGGGGCTGTACTTAGCGGATGAAGGGTTGTAACTTGGTGA
GGTGGGACTGTAACTTGGAGAAGTAGGACTGTAGCTTGGGGAAGTAGGACTGTACCCAGGTGAAGTTGGGCTGTAAGCAGGGGAGGTTGGGCTGTAGGAA
GGGGAGGTCGGGCTGTAGGATGGTGATGTTGGGCTGTAGGAAGGAGAGGTCGGGCTGTAAGAGGGTGAGGTTGGGCTGTAGGAGGGTGAGGTTGGGCTGT
AGGATGGTGATGTCGGGCTGTAGGAAGGAGAGGTCGGGCTGTAAGCTGGCGATGTAGGGCTGTAGCTAGGTGATGTGGGTGAGTAGCTTGGTGAGGTAGG
GGAGTAGCTAGGTGAAGTGGGTGAGTAGGTAGGACTTGTTGGGCTATAACCGGGTGAACTTGGGCTGTAAGTTGGAGAGGTGGGACTGTAACCCGGAGAT
GTAGGGCTATAGCCCGGTGAGGTTGGGCTATAACCAGGCGAGGTGGGGCTGTATCCCGGAGATGATGGGCTGTACCC